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Hydroxyproline is a major component of the protein collagen, [3] comprising roughly 13.5% of mammalian collagen. Hydroxyproline and proline play key roles for collagen stability. [ 4 ] They permit the sharp twisting of the collagen helix. [ 5 ]
In 1954, Ramachandran & Kartha (13, 14) advanced a structure for the collagen triple helix on the basis of fiber diffraction data. It consists of a triple helix made of the repetitious amino acid sequence glycine-X-Y, where X and Y are frequently proline or hydroxyproline. [2] [3] Collagen folded into a triple helix is known as tropocollagen.
Chemical Structure of Type I Collagen. Type I collagen has a triple-helical form which is caused by its amino acid composition. Its specific domain follows an order of G-X-Y In which the X and Y slots are occupied by any amino acid other than glycine however these slots are typically occupied by both hydroxyproline and proline, not in any particular order. [5]
In nature, proline, hydroxyproline, pipecolic acid and sarcosine are well-known secondary amino acids. Proline is the only proteinogenic secondary amino acids. Other secondary amino acids are non-proteinogenic amino acids. In protein, hydroxyproline is incorporated into protein by hydroxylation of proline.
The cyclic structure of proline's side chain locks the angle φ at approximately −65°. [19] Proline acts as a structural disruptor in the middle of regular secondary structure elements such as alpha helices and beta sheets; however, proline is commonly found as the first residue of an alpha helix and also in the edge strands of beta sheets.
The systematic name of this enzyme class is UDP-N-acetyl-D-glucosamine:[Skp1-protein]-hydroxyproline N-acetyl-D-glucosaminyl-transferase. Other names in common use include Skp1-HyPro GlcNAc-transferase , UDP-N-acetylglucosamine (GlcNAc):hydroxyproline polypeptide , GlcNAc-transferase , UDP-GlcNAc:Skp1-hydroxyproline GlcNAc-transferase , and UDP ...
proline. Secondary amino acids, amino acids containing a secondary amine group are sometimes named imino acids, [2] [3] though this usage is obsolescent. [1] The only proteinogenic amino acid of this type is proline, although the related non-proteinogenic amino acids hydroxyproline [4] [5] [6] and pipecolic acid [7] have often been included in studies of this class of compounds.
Extensin hydroxyproline is uniquely glycosylated with short chains of L-arabinose [8] that further rigidify [9] and increase hydrophilicity. Generally the serine has a single galactose attached. Generally the serine has a single galactose attached.
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