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During sequencing, each base in the template is sequenced twice, and the resulting data are decoded according to this scheme. SOLiD (Sequencing by Oligonucleotide Ligation and Detection) is a next-generation DNA sequencing technology developed by Life Technologies and has been commercially available since
[1] Dynamic software analysis is used to measure the quality and efficacy of software test data, where the quantification is performed in terms of structural units of the code under test. When used to quantify the structural units exercised by a given set of test data, dynamic analysis is also referred to as structural coverage analysis .
Software testing can also be performed by non-dedicated software testers. In the 1980s, the term software tester started to be used to denote a separate profession. Notable software testing roles and titles include: [65] test manager, test lead, test analyst, test designer, tester, automation developer, and test administrator. [66]
An ABI defines how data structures or computational routines are accessed in machine code, which is a low-level, hardware-dependent format. In contrast, an application programming interface (API) defines this access in source code , which is a relatively high-level, hardware-independent, often human-readable format.
The fourth is a great example of how interactive graphical tools enable a worker involved in sequence analysis to conveniently execute a variety if different computational tools to explore an alignment's phylogenetic implications; or, to predict the structure and functional properties of a specific sequence, e.g., comparative modelling.
The BFAST Web Server can be used to align short reads to reference sequences in both nucleotide space as well as ABI SOLiD color space. Utilities include BFAST alignment, conversion between nucleotide and color space, calculating the a priori power of the alignments, as well as a utility to perform Smith Waterman alignment .
Chipster is a user-friendly analysis software for high-throughput data. It contains over 350 analysis tools for next generation sequencing (NGS), microarray, proteomics and sequence data. Users can save and share automatic analysis workflows, and visualize data interactively using a built-in genome browser and many other visualizations.
The Sequence View is used to visualize, analyze and modify nucleic acid or protein sequences. Depending on the sequence type and the options selected, the following views can be present in the Sequence View window: 3D structure view; Circular view; Chromatogram view; Graphs View: GC-content, AG-content, and other; Dot plot view