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There is a single type strain for each prokaryotic species, but different culture collections may designate a unique name for the same strain. For example, the type strain of E. coli (originally strain U5/41) is called ATCC 11775 by the American Type Culture Collection, DSM 30083 by the German Collection of Microorganisms and Cell Cultures, JCM ...
n/a Ensembl ENSG00000180257 n/a UniProt Q0VGE8 n/a RefSeq (mRNA) NM_001202457 NM_001031665 NM_001202456 n/a RefSeq (protein) NP_001026835 NP_001189385 NP_001189386 n/a Location (UCSC) Chr 19: 52.95 – 52.96 Mb n/a PubMed search n/a Wikidata View/Edit Human Zinc Finger Protein 816 (ZNF816) is a protein encoded by the ZNF816 gene, located on chromosome 19 in humans. Gene The ZNF816 gene is ...
The quickest way to identify to match an isolated strain to a species or genus today is done by amplifying its 16S gene with universal primers and sequence the 1.4kb amplicon and submit it to a specialised web-based identification database, namely either Ribosomal Database Project Archived 19 August 2020 at the Wayback Machine, which align the ...
A strain is a genetic variant or subtype of a microorganism (e.g., a virus, bacterium or fungus). For example, a "flu strain" is a certain biological form of the influenza or "flu" virus. These flu strains are characterized by their differing isoforms of surface proteins.
The coding region of a gene, also known as the coding DNA sequence (CDS), is the portion of a gene's DNA or RNA that codes for a protein. [1] Studying the length, composition, regulation, splicing, structures, and functions of coding regions compared to non-coding regions over different species and time periods can provide a significant amount of important information regarding gene ...
DNA barcoding is a method of species identification using a short section of DNA from a specific gene or genes. The premise of DNA barcoding is that by comparison with a reference library of such DNA sections (also called "sequences"), an individual sequence can be used to uniquely identify an organism to species, just as a supermarket scanner uses the familiar black stripes of the UPC barcode ...
For example, although the guidelines would call p53 protein "TP53" in humans or "Trp53" in mice, most authors call it "p53" in both (and even refuse to call it "TP53" if edits or queries try to), not least because of the biologic principle that many proteins are essentially or exactly the same molecules regardless of mammalian species.
For example, one study [12] used serial passage in baboons to create a strain of HIV-2 that is particularly virulent to baboons. Typical strains of HIV-2 only infect baboons slowly. [ 12 ] This specificity makes it challenging for scientists to use HIV-2 in animal models of HIV-1, because the animals in the model will only show symptoms slowly.