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  2. Comparison of software for molecular mechanics modeling

    en.wikipedia.org/wiki/Comparison_of_software_for...

    High performance GPU-accelerated ab initio molecular dynamics and TD/DFT software package for very large molecular or even nanoscale systems. Runs on NVIDIA GPUs and 64-bit Linux, has heavily optimized CUDA code. Proprietary, trial licenses available PetaChem LLC: TINKER: I Yes Yes Yes Yes I I Yes Yes Software tools for molecular design-Tinker ...

  3. Molecular model - Wikipedia

    en.wikipedia.org/wiki/Molecular_model

    Beever's ball and stick model of ruby (Cr-doped corundum) made with acrylic balls and stainless steel rods. However, most molecules require holes at other angles and specialist companies manufacture kits and bespoke models. Besides tetrahedral, trigonal and octahedral holes, there were all-purpose balls with 24 holes. These models allowed ...

  4. Molecular modelling - Wikipedia

    en.wikipedia.org/wiki/Molecular_modelling

    Molecular modelling encompasses all methods, theoretical and computational, used to model or mimic the behaviour of molecules. [1] The methods are used in the fields of computational chemistry, drug design, computational biology and materials science to study molecular systems ranging from small chemical systems to large biological molecules and material assemblies.

  5. Molecular design software - Wikipedia

    en.wikipedia.org/wiki/Molecular_design_software

    Molecular design software is notable software for molecular modeling, that provides special support for developing molecular models de novo. In contrast to the usual molecular modeling programs, such as for molecular dynamics and quantum chemistry , such software directly supports the aspects related to constructing molecular models, including:

  6. List of software for nanostructures modeling - Wikipedia

    en.wikipedia.org/wiki/List_of_software_for...

    Three dimensional molecular model of an all-carbon tubular fullerene. This is a list of notable computer programs that are used to model nanostructures at the levels of classical mechanics [1] and quantum mechanics. Furiousatoms [2] - a powerful software for molecular modelling and visualization; Aionics.io [3] - a powerful platform for ...

  7. Molecular Modelling Toolkit - Wikipedia

    en.wikipedia.org/wiki/Molecular_Modelling_Toolkit

    The Molecular Modeling Toolkit is a library that implements common molecular simulation techniques, with an emphasis on biomolecular simulations. It uses modern software engineering techniques (object-oriented design, a high-level language) in order to overcome limitations associated with the large monolithic simulation programs that are ...

  8. Tinker (software) - Wikipedia

    en.wikipedia.org/wiki/Tinker_(software)

    Tinker, previously stylized as TINKER, is a suite of computer software applications for molecular dynamics simulation. The codes provide a complete and general set of tools for molecular mechanics and molecular dynamics, with some special features for biomolecules. The core of the software is a modular set of callable routines which allow ...

  9. Category:Molecular modelling software - Wikipedia

    en.wikipedia.org/wiki/Category:Molecular...

    Pages in category "Molecular modelling software" The following 72 pages are in this category, out of 72 total. ... Swiss-model; U. UCSF Chimera; V. Visual Molecular ...

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