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Modelling biological systems is a significant task of systems biology and mathematical biology. [ a ] Computational systems biology [ b ] [ 1 ] aims to develop and use efficient algorithms , data structures , visualization and communication tools with the goal of computer modelling of biological systems.
The process of dimensional modeling builds on a 4-step design method that helps to ensure the usability of the dimensional model and the use of the data warehouse. The basics in the design build on the actual business process which the data warehouse should cover. Therefore, the first step in the model is to describe the business process which ...
Cellular automata have found application in various areas, including physics, theoretical biology and microstructure modeling. A cellular automaton consists of a regular grid of cells , each in one of a finite number of states , such as on and off (in contrast to a coupled map lattice ).
In developmental biology, pattern formation refers to the generation of complex organizations of cell fates in space and time. The role of genes in pattern formation is an aspect of morphogenesis, the creation of diverse anatomies from similar genes, now being explored in the science of evolutionary developmental biology or evo-devo.
Protein structural modeling can be performed by examining how well the amino acid substitutions fit into the core of the three-dimensional structure. Family (structural context) as used in the FSSP database ( Families of structurally similar proteins ) and the DALI/FSSP Web site, two structures that have a significant level of structural ...
Three-dimensional structure of a protein. Structural bioinformatics is the branch of bioinformatics that is related to the analysis and prediction of the three-dimensional structure of biological macromolecules such as proteins, RNA, and DNA. It deals with generalizations about macromolecular 3D structures such as comparisons of overall folds ...
Mathematical and theoretical biology, or biomathematics, is a branch of biology which employs theoretical analysis, mathematical models and abstractions of living organisms to investigate the principles that govern the structure, development and behavior of the systems, as opposed to experimental biology which deals with the conduction of ...
Molecular modelling encompasses all methods, theoretical and computational, used to model or mimic the behaviour of molecules. [1] The methods are used in the fields of computational chemistry, drug design, computational biology and materials science to study molecular systems ranging from small chemical systems to large biological molecules and material assemblies.