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  2. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    Salmon is a software tool for computing transcript abundance from RNA-seq data using either an alignment-free (based directly on the raw reads) or an alignment-based (based on pre-computed alignments) approach. It uses an online stochastic optimization approach to maximize the likelihood of the transcript abundances under the observed data.

  3. DESeq2 - Wikipedia

    en.wikipedia.org/wiki/DESeq2

    DESeq2 is a software package in the field of bioinformatics and computational biology for the statistical programming language R.It is primarily employed for the analysis of high-throughput RNA sequencing (RNA-seq) data to identify differentially expressed genes between different experimental conditions.

  4. Sagan (software) - Wikipedia

    en.wikipedia.org/wiki/Sagan_(software)

    It is written in C and uses a multi-threaded architecture to deliver high performance log & event analysis. Sagan's structure and rules work similarly to the Sourcefire Snort IDS/IPS engine. This allows Sagan to be compatible with Snort or Suricata rule management software and gives Sagan the ability to correlate with Snort IDS/IPS data.

  5. MA plot - Wikipedia

    en.wikipedia.org/wiki/MA_plot

    The plot visualizes the differences between measurements taken in two samples, by transforming the data onto M (log ratio) and A (mean average) scales, then plotting these values. Though originally applied in the context of two channel DNA microarray gene expression data, MA plots are also used to visualise high-throughput sequencing analysis.

  6. List of mass spectrometry software - Wikipedia

    en.wikipedia.org/wiki/List_of_mass_spectrometry...

    Link library and tools that are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis. ProteoWorker: Proprietary: Cloud-based software for proteomics data analysis including COMET, Peptide Prophet, ProteinProphet and extensive data sorting, filtering and annotation tools.

  7. Mets and pitcher Sean Manaea finalize $75 million, 3-year deal

    www.aol.com/mets-pitcher-sean-manaea-finalize...

    Sean Manaea and the New York Mets finalized a $75 million, three-year contract Friday night that keeps one of the team's best pitchers last season at the front of a remodeled rotation. Manaea ...

  8. Why Walgreens Is Shuttering 1,200 Stores While Pharma ... - AOL

    www.aol.com/why-walgreens-shuttering-1-200...

    APPLE (AAPL): Free Stock Analysis Report TESLA (TSLA): Free Stock Analysis Report This article Why Walgreens Is Shuttering 1,200 Stores While Pharma Sales Soar To $722 Billion originally appeared ...

  9. TikTok Ban Signed Into Law: What It Means For America's $15 ...

    www.aol.com/tiktok-ban-signed-law-means...

    TikTok will be banned in the United States on Jan. 19, 2025, after a federal appeals court rejected its bid to overturn the ban that President Biden signed in April. The law states that if TikTok ...

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