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  2. Model organism database - Wikipedia

    en.wikipedia.org/wiki/Model_Organism_Database

    [1] [2] They allow users to analyse results and interpret datasets, and the data they generate are increasingly used to describe less well studied species. [1] Where possible, MODs share common approaches to collect and represent biological information.

  3. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    A computer-assisted design (CAD) tool for synthetic biology, used to design genetic constructs based on grammar rules. Linux, macOS, Windows: Apache License 2.0 GenoCAD Team (Virginia Bioinformatics Institute) Genomespace: Centralized web application that provides data format transformations and facilitates connections with other bioinformatics ...

  4. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    Biological databases are stores of biological information. [1] The journal Nucleic Acids Research regularly publishes special issues on biological databases and has a list of such databases. The 2018 issue has a list of about 180 such databases and updates to previously described databases. [2]

  5. Biological database - Wikipedia

    en.wikipedia.org/wiki/Biological_database

    The Database Issue of NAR is freely available, and categorizes many of the public biological databases. A companion database to the issue called the Online Molecular Biology Database Collection lists 1,380 online databases. [15] Other collections of databases exist such as MetaBase and the Bioinformatics Links Collection. [16] [17]

  6. AceDB - Wikipedia

    en.wikipedia.org/wiki/AceDB

    AceDB is a biological database for handling genomic data. It was developed by Richard M. Durbin and Jean Thierry-Mieg in 1989. [1] AceDB stands for a C. elegans database. Although AceDB was initially created as a database specifically for the nematode worm it has also come to mean the database software itself, which has been used to store ...

  7. Matthew Bonnan - Wikipedia

    en.wikipedia.org/wiki/Matthew_Bonnan

    Matthew Bonnan in 2022. Matthew Bonnan [1] is an American paleobiologist, a Professor of Biological Sciences at Stockton University, and as of 2021 a singer/songwriter.His research combines traditional descriptive and anatomical study with computer-aided morphometric analysis and modeling of vertebrate skeletons, and he is the co-discoverer of three new species of dinosaurs.

  8. Molecular Evolutionary Genetics Analysis - Wikipedia

    en.wikipedia.org/wiki/Molecular_Evolutionary...

    MEGA version 2 (MEGA2), which was coauthored by an additional investigator Ingrid Jakobson, was released in 2001. [3] All the computer programs and the readme files of this version could be sent electronically due to advances in computer technology.

  9. Generic Model Organism Database - Wikipedia

    en.wikipedia.org/.../Generic_Model_Organism_Database

    Chado makes extensive use of controlled vocabularies to type all entities in the database; for example: genes, transcripts, exons, transposable elements, etc., are stored in a feature table, with the type provided by Sequence Ontology. When a new type is added to the Sequence Ontology, the feature table requires no modification, only an update ...