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SymPy is an open-source Python library for symbolic computation. It provides computer algebra capabilities either as a standalone application, as a library to other applications, or live on the web as SymPy Live [2] or SymPy Gamma. [3] SymPy is simple to install and to inspect because it is written entirely in Python with few dependencies.
Matplotlib (portmanteau of MATLAB, plot, and library [3]) is a plotting library for the Python programming language and its numerical mathematics extension NumPy.It provides an object-oriented API for embedding plots into applications using general-purpose GUI toolkits like Tkinter, wxPython, Qt, or GTK.
Moreover, complementary Python packages are available; SciPy is a library that adds more MATLAB-like functionality and Matplotlib is a plotting package that provides MATLAB-like plotting functionality. Although matlab can perform sparse matrix operations, numpy alone cannot perform such operations and requires the use of the scipy.sparse library.
is how one would use Fortran to create arrays from the even and odd entries of an array. Another common use of vectorized indices is a filtering operation. Consider a clipping operation of a sine wave where amplitudes larger than 0.5 are to be set to 0.5. Using S-Lang, this can be done by y = sin(x); y[where(abs(y)>0.5)] = 0.5;
It provides a rich Excel-like user interface and its built-in vector programming language FPScript has a syntax similar to MATLAB. FreeMat, an open-source MATLAB-like environment with a GPL license. GNU Octave is a high-level language, primarily intended for numerical computations. It provides a convenient command-line interface for solving ...
GNU Octave is an open source high level programming language and library, including a command line interface and GUI, analogous to commercial alternatives such as Maple, MATLAB, Mathematica, etc. APIs, functions and libraries can be called from many platforms, including high level engineering programs, where functions are, in many cases ...
NumPy, a language extension that adds support for large and fast, multi-dimensional arrays and matrices; Plotly is a scientific plotting library for creating browser-based graphs. SageMath is a large mathematical software application which integrates the work of nearly 100 free software projects. SymPy, a symbolic mathematical calculations package
A common method for evaluating how well normalized an array is, is to plot an MA plot of the data. MA plots can be produced using programs and languages such as R and MATLAB. [6] [7] Raw Affy data contains about twenty probes for the same RNA target. Half of these are "mismatch spots", which do not precisely match the target sequence.