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The carbonyl center in thioesters is more reactive toward amine than oxygen nucleophiles, giving amides: Thioesters are components of the native chemical ligation method for peptide synthesis. This reaction is exploited in native chemical ligation, a protocol for peptide synthesis. [8] In a related reaction, thioesters can be converted into ...
A classic example of NGP is the reaction of a sulfur or nitrogen mustard with a nucleophile, the rate of reaction is much higher for the sulfur mustard and a nucleophile than it would be for a primary or secondary alkyl chloride without a heteroatom. [4] Ph−S−CH 2 −CH 2 −Cl reacts with water 600 times faster than CH 3 −CH 2 −CH 2 ...
A hydroxide ion acting as a nucleophile in an S N 2 reaction, converting a haloalkane into an alcohol. In chemistry, a nucleophile is a chemical species that forms bonds by donating an electron pair. All molecules and ions with a free pair of electrons or at least one pi bond can act as nucleophiles. Because nucleophiles donate electrons, they ...
The second step is the loss of a sulfur dioxide molecule and its replacement by the chloride, which was attached to the sulphite group. The difference between S N 1 and S N i is actually that the ion pair is not completely dissociated , and therefore no real carbocation is formed, which else would lead to a racemisation.
A sulfur nucleophile improved the enzymes transferase activity (sometimes called subtiligase). Selenium and tellurium nucleophiles converted the enzyme into an oxidoreductase. [51] [52] When the nucleophile of TEV protease was converted from cysteine to serine, it protease activity was strongly reduced, but was able to be restored by directed ...
The process for class 1 inteins begins with an N-O or N-S shift when the side chain of the first residue (a serine, threonine, or cysteine) of the intein portion of the precursor protein nucleophilically attacks the peptide bond of the residue immediately upstream (that is, the final residue of the N-extein) to form a linear ester (or thioester) intermediate.
This is because α-nucleophiles showing the α-effect have smaller HOMO(nucleophile)-LUMO(substrate) gap, in other words, high HOMO energy level that allows more orbital interaction. Examples of α-nucleophiles with α-effects are shown in Figure 4. The α-nucleophiles have smaller HOMO lobes than the parent normal nucleophile. Figure 4.
The biological use of sulfur as an alternative to carbon is purely hypothetical, especially because sulfur usually forms only linear chains rather than branched ones. (The biological use of sulfur as an electron acceptor is widespread and can be traced back 3.5 billion years on Earth, thus predating the use of molecular oxygen. [28]