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Gene Designer is a computer software package for bioinformatics. [1] [2] It is used by molecular biologists from academia, government, and the pharmaceutical, chemical, agricultural, and biotechnology industries to design, [3] clone, and validate genetic sequences. It is proprietary software, released as freeware needing registration.
Automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences Eukaryotes [1] FragGeneScan: Predicting genes in complete genomes and sequencing Reads: Prokaryotes, Metagenomes [2] ATGpr: Identifies translational initiation sites in cDNA sequences: Human [3] Prodigal
EMBOSS is a free c software analysis package developed for the needs of the molecular biology and bioinformatics user community. [1] The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web.
The source code for the package is distributed freely and compiled binaries are available for Linux, macOS and Windows platforms. As of 2017, the Genome Biology paper describing the original Bowtie method has been cited more than 11,000 times. [3] Bowtie is open-source software and is currently maintained by Johns Hopkins University.
Software suite to search and cluster huge sequence sets. Similar sensitivity to BLAST and PSI-BLAST but orders of magnitude faster: Protein: Steinegger M, Mirdita M, Galiez C, Söding J [10] 2017 USEARCH Ultra-fast sequence analysis tool: Both: Edgar, R. C. (2010). "Search and clustering orders of magnitude faster than BLAST". Bioinformatics.
Small microbial genomes PacBio/Oxford Nanopore reads [16] 2016 / 2018 OS link: MaSuRCA Any size, haploid/diploid genomes Illumina and PacBio/Oxford Nanopore data, legacy 454 and Sanger data [17] 2011 / 2018 OS link: Newbler: genomes, ESTs 454, Sanger 454 Life Sciences: 2004/2012 C link: Phrap: genomes Sanger, 454, Solexa Green, P. 1994 / 2008 C ...
YouTube is going large on generative AI — positioning new features coming to the platform as enabling creators to “unlock new forms of expression.” At its Made on YouTube creator event ...
Universal Document Converter is a virtual printer and PDF creator for Microsoft Windows developed by fCoder Group. It can create PDF documents (as raster images or searchable text) and files in graphic formats JPEG, TIFF, PNG, GIF, PCX, DCX and BMP. [3] It can create graphic or PDF files from any document that can be printed.