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samtools sort -m 5000000 unsorted_in.bam sorted_out Read the specified unsorted_in.bam as input, sort it in blocks up to 5 million k (5 Gb) [ units verification needed ] and write output to a series of bam files named sorted_out.0000.bam , sorted_out.0001.bam , etc., where all bam 0 reads come before any bam 1 read, etc. [ verification needed ]
The 5.0 version of the program was released in 2002, adding a XSLT processor, XSLT debugger, a WSDL editor, HTML importer, and a Java as well as C++ generator. The version's XML document editor was redesigned to allow for easier use by businesses. [7] XMLSpy 2006 was given the Platinum Award by SQL Pro Magazine's Editor's choice awards. [8]
PLY is a parsing tool written purely in Python. It is, in essence, a re-implementation of Lex and Yacc originally in C-language . It was written by David M. Beazley .
^ XML data bindings and SOAP serialization tools provide type-safe XML serialization of programming data structures into XML. Shown are XML values that can be placed in XML elements and attributes. ^ This syntax is not compatible with the Internet-Draft, but is used by some dialects of Lisp.
Google OR-Tools is a free and open-source software suite developed by Google for solving linear programming (LP), mixed integer programming (MIP), constraint programming (CP), vehicle routing (VRP), and related optimization problems. [3] OR-Tools is a set of components written in C++ but provides wrappers for Java, .NET and Python.
Spring Tools Suite and Eclipse have a variety of built-in and free plugins matching or exceeding the quality of the paid versions. They come with a content assist tool that completes tags and can search for classes in any java classpath. They also include validation, bean creation, and commit tools.
SAX (Simple API for XML) is an event-driven online algorithm for lexing and parsing XML documents, with an API developed by the XML-DEV mailing list. [1] SAX provides a mechanism for reading data from an XML document that is an alternative to that provided by the Document Object Model (DOM).
XMLStarlet is a set of command line utilities (toolkit) to query, transform, validate, and edit XML documents and files using a simple set of shell commands in a way similar to how it is done with UNIX grep, sed, awk, diff, patch, join, etc commands.