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fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.
DESeq2 is a software package in the field of bioinformatics and computational biology for the statistical programming language R. It is primarily employed for the analysis of high-throughput RNA sequencing (RNA-seq) data to identify differentially expressed genes between different experimental conditions.
Sequencing RNA in its native form preserves modifications like methylation, allowing them to be investigated directly and simultaneously. [21] Another benefit of single-molecule RNA-Seq is that transcripts can be covered in full length, allowing for higher confidence isoform detection and quantification compared to short-read sequencing.
JonBenet Ramsey's father, John Ramsey, believes his daughter's 1996 murder case may have possible ties to a separate 1997 assault case that occurred not far from their home.
Feature scaling is a method used to normalize the range of independent variables or features of data. In data processing , it is also known as data normalization and is generally performed during the data preprocessing step.
Los Angeles County’s top prosecutor said Friday that he had not made a decision about whether the prison sentences for Erik and Lyle Menendez, who are serving life without parole for the heavily ...
By Jonathan Stempel (Reuters) -Google failed to persuade a federal judge to dismiss a privacy class action claiming it collected personal data from people's cellphones after they switched off a ...
A non-normalized loop may begin at different indexes, increment by not-unitary amounts and have exit conditions complicated to define. Such loops are hard to optimize, vectorize and even traverse, especially if functions are executed on any part of the loop conditions.