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  2. List of systems biology modeling software - Wikipedia

    en.wikipedia.org/wiki/List_of_systems_biology...

    The vast majority of modern systems biology modeling software support SBML, which is the de facto standard for exchanging models of biological cellular processes. Some tools also support CellML , a standard used for representing physiological processes.

  3. List of SysML tools - Wikipedia

    en.wikipedia.org/wiki/List_of_SysML_tools

    Software Ideas Modeler: Dusan Rodina Windows, Linux 2009-08-06 2021-07-27 No Commercial, Freeware C# SysON Obeo & CEA List Web 2023 2024.11 [18] Yes Eclipse Public License Java System Architect: UNICOM Global: Windows 1988 & 2005 (for SA XT web version) 2022-10-18 No Commercial C++ and Visual Basic; JavaScript for SA XT web sister product ...

  4. Cell-free system - Wikipedia

    en.wikipedia.org/wiki/Cell-free_system

    Engineering of metabolic processes have been achieved through cell-free systems. [ 24 ] [ 10 ] [ 3 ] Bujara et al. , for example, were able to use glycolytic network extracts, consisting of enzymes from E. coli that produced dihydroxyacetone phosphate , to analyze in real-time the metabolite concentrations while altering enzyme levels, with the ...

  5. List of computer simulation software - Wikipedia

    en.wikipedia.org/wiki/List_of_computer...

    FreeFem++ - Free, open-source, multiphysics Finite Element Analysis (FEA) software. Freemat - a free environment for rapid engineering, scientific prototyping and data processing using the same language as MATLAB and GNU Octave. Gekko - simulation software in Python with machine learning and optimization

  6. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Free open source GNU GPLv2 or later EMBOSS: Suite of packages for sequencing, searching, etc. written in C: Linux, macOS, Unix, Windows [4] GPL and LGPL: Collaborative project Galaxy: Scientific workflow and data integration system Unix-like: Academic Free: Collaborative project GenePattern

  7. Modelling biological systems - Wikipedia

    en.wikipedia.org/wiki/Modelling_biological_systems

    Modelling biological systems is a significant task of systems biology and mathematical biology. [ a ] Computational systems biology [ b ] [ 1 ] aims to develop and use efficient algorithms , data structures , visualization and communication tools with the goal of computer modelling of biological systems.

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  9. List of computer-aided engineering software - Wikipedia

    en.wikipedia.org/wiki/List_of_computer-aided...

    Power engineering software - software for power stations, overhead power lines, transmission towers, electrical grids, grounding, electrical substations, and Lightning; List of discrete event simulation software - Discrete-event simulation; List of computer algebra systems - Computer algebra system; List of numerical-analysis software; List of ...

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    free systems available