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  2. Enhanceosome - Wikipedia

    en.wikipedia.org/wiki/Enhanceosome

    As a result, the enhanceosome also recruits non histone architectural transcription factors, called high-mobility group (HMG) proteins, which are responsible for regulating chromatin structure. [3] These factors do not bind to the enhancer, but instead are used to restructure the DNA to ensure that the genes can be accessed by the transcription ...

  3. STARR-seq - Wikipedia

    en.wikipedia.org/wiki/STARR-seq

    In eukaryotes, transcription is regulated by sequence-specific DNA-binding proteins (transcription factors) associated with a gene’s promoter and also by distant control sequences including enhancers. Enhancers are non-coding DNA sequences, containing several binding sites for a variety of transcription factors. [2]

  4. Primary transcript - Wikipedia

    en.wikipedia.org/wiki/Primary_transcript

    Activation of transcription depends on whether or not the transcription elongation complex, itself consisting of a variety of transcription factors, can induce RNA polymerase to dissociate from the Mediator complex that connects an enhancer region to the promoter. [4] Role of transcription factors and enhancers in gene expression regulation

  5. Enhancer RNA - Wikipedia

    en.wikipedia.org/wiki/Enhancer_RNA

    Bidirectional transcription at enhancer sites generates comparatively shorter (0.5-2kb) and non-polyadenylated eRNAs. Enhancers that generate polyA- eRNAs have a chromatin signature with a higher H3K4me1/me3 ratio than 1D-eRNAs. In general, enhancer transcription and production of bidirectional eRNAs demonstrate a strong correlation of enhancer ...

  6. Enhancer (genetics) - Wikipedia

    en.wikipedia.org/wiki/Enhancer_(genetics)

    In genetics, an enhancer is a short (50–1500 bp) region of DNA that can be bound by proteins to increase the likelihood that transcription of a particular gene will occur. [1] [2] These proteins are usually referred to as transcription factors. Enhancers are cis-acting. They can be located up to 1 Mbp (1,000,000 bp) away from the gene ...

  7. Transcriptional regulation - Wikipedia

    en.wikipedia.org/wiki/Transcriptional_regulation

    Transcription factors can be divided in two main categories: activators and repressors. While activators can interact directly or indirectly with the core machinery of transcription through enhancer binding, repressors predominantly recruit co-repressor complexes leading to transcriptional repression by chromatin condensation of enhancer regions.

  8. DNA footprinting - Wikipedia

    en.wikipedia.org/wiki/DNA_footprinting

    The regulation of transcription has been studied extensively, and yet there is still much that is unknown. Transcription factors and associated proteins that bind promoters, enhancers, or silencers to drive or repress transcription are fundamental to understanding the unique regulation of individual genes within the genome. Techniques like DNA ...

  9. Cap analysis of gene expression - Wikipedia

    en.wikipedia.org/wiki/Cap_Analysis_of_Gene...

    Unlike a similar technique serial analysis of gene expression (SAGE) in which tags come from other parts of transcripts, CAGE is primarily used to locate exact transcription start sites in the genome. This knowledge in turn allows a researcher to investigate promoter structure necessary for gene expression.

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