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"Genome arithmetic"—manipulation of coordinate sets and the extraction of sequences from a BED file. Linux: MIT: QuinlanLab, University of Utah: Bioclipse: Visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP) Linux, macOS, Windows [1] Eclipse Public: The Bioclipse Project Bioconductor
Biological databases are stores of biological information. [1] The journal Nucleic Acids Research regularly publishes special issues on biological databases and has a list of such databases. The 2018 issue has a list of about 180 such databases and updates to previously described databases. [2]
The Find, Find Next, and Find Previous are used to find occurrences in certain sections of a query sequence. Next N is a command the will be able to go to the next indeterminate (N) nucleotide. Find in a File allows a user to search another file for selected sequences. Do BLAST Search command will perform a BLAST search in a separate web browser.
Audio file icons of various formats. An audio file format is a file format for storing digital audio data on a computer system. The bit layout of the audio data (excluding metadata) is called the audio coding format and can be uncompressed, or compressed to reduce the file size, often using lossy compression.
There are a number of free sound effects resources of public domain or free content sound recordings appropriate for Wikipedia use available online, and as well as in other contexts. All files should be converted to ogg , Wikipedia's patent-free format of choice.
On contact with the intein-free copy, the HEG domain initiates the DNA double-stranded break repair mechanism. This process causes the intein sequence to be copied from the original source gene to the intein-free gene. This is an example of protein directly editing DNA sequence, as well as increasing the sequence's heritable propagation.
[1] Serial Analysis of Gene Expression ( SAGE ) is a transcriptomic technique used by molecular biologists to produce a snapshot of the messenger RNA population in a sample of interest in the form of small tags that correspond to fragments of those transcripts.
A team formed with collaborators of the Biodesign Institute at Arizona State University and Harvard's Wyss Institute for Biologically Inspired Engineering developed a biological computer inside E. Coli that responded to a dozen inputs. The team called the computer "ribocomputer", as it was composed of ribonucleic acid.
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