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  2. Gene orders - Wikipedia

    en.wikipedia.org/wiki/Gene_orders

    Gene order is the permutation of genome arrangement. A fair amount of research has been done trying to determine whether gene orders evolve according to a molecular clock (molecular clock hypothesis) or in jumps (punctuated equilibrium). By comparing gene orders in dissimilar organisms, scientists are able to develop a molecular phylogeny tree. [1]

  3. Punnett square - Wikipedia

    en.wikipedia.org/wiki/Punnett_square

    The Punnett square works, however, only if the genes are independent of each other, which means that having a particular allele of gene "A" does not alter the probability of possessing an allele of gene "B". This is equivalent to stating that the genes are not linked, so that the two genes do not tend to sort together during meiosis.

  4. DNA and RNA codon tables - Wikipedia

    en.wikipedia.org/wiki/DNA_and_RNA_codon_tables

    A codon table can be used to translate a genetic code into a sequence of amino acids. [1] [2] The standard genetic code is traditionally represented as an RNA codon table, because when proteins are made in a cell by ribosomes, it is messenger RNA (mRNA) that directs protein synthesis. [2] [3] The mRNA sequence is determined by the sequence of ...

  5. Genotype frequency - Wikipedia

    en.wikipedia.org/wiki/Genotype_frequency

    In other words, 30% of the alleles for this gene in the population are the a allele. Compare genotype frequency: let's now calculate the genotype frequency of aa homozygotes (white-flowered plants). f ( a a ) = 9 49 + 42 + 9 = 9 100 = 0.09 = ( 9 % ) {\displaystyle {\begin{aligned}f({aa})&={9 \over 49+42+9}={9 \over 100}=0.09=(9\%)\\\end{aligned}}}

  6. Gene prediction - Wikipedia

    en.wikipedia.org/wiki/Gene_prediction

    Ab Initio gene prediction is an intrinsic method based on gene content and signal detection. Because of the inherent expense and difficulty in obtaining extrinsic evidence for many genes, it is also necessary to resort to ab initio gene finding, in which the genomic DNA sequence alone is systematically searched for certain tell-tale signs of protein-coding genes.

  7. Genomic organization - Wikipedia

    en.wikipedia.org/wiki/Genomic_organization

    Genome sizes and corresponding composition of six major model organisms as pie charts. The increase in genome size correlates with the vast expansion of noncoding (i.e., intronic, intergenic, and interspersed repeat sequences) and repeat DNA (e.g., satellite, LINEs, short interspersed nuclear element (SINEs), DNA (Alu sequence), in red) sequences in more complex multicellular organisms.

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  9. Genetic distance - Wikipedia

    en.wikipedia.org/wiki/Genetic_distance

    Population Genetics: Genetic distance can help in studying population genetics, understanding intra and inter-population genetic diversity. Taxonomy and Species Delimitation : Determining genetic distance through DNA barcoding is an effective tool for delimiting species especially identifying cryptic species . [ 15 ]