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Fixed length and fixed angle drawing; Automatic alignment of figures; Detection of structures, text, and arrows, and their automatic placement; Can automatically draw rings and other structures - has all standard amino acids and nucleic acids in a built-in library; Retrieval of structures from a network database based on CAS number, formula, or ...
ChemWindow is a chemical structure drawing molecule editor and publishing program now published by John Wiley & Sons as of 2020, [1] originally developed by Bio-Rad Laboratories, Inc. [2] [3] It was first developed by SoftShell International in the 1990s. [4]
Split PDF files in a number of ways: After every page, even pages or odd pages; After a given set of page numbers; Every n pages; By bookmark level; By size, where the generated files will roughly have the specified size; Rotate PDF files where multiple files can be rotated, either every page or a selected set of pages (i.e. Mb).
Printing system can render any document to a PDF file, thus any Linux program with print capability can produce PDF files Pdftk: GPLv2: No Yes Yes Command-line tools to merge, split, en-/decrypt, watermark/stamp and manipulate PDF document files. Front end to an older version of the iText library. poppler: GNU GPL: Yes Yes
For example, molecules can be displayed as ball-and-stick models, space-filling models, ribbon diagrams, etc. [4] Jmol supports a wide range of chemical file formats, including Protein Data Bank (pdb), Crystallographic Information File (cif), MDL Molfile (mol), and Chemical Markup Language (CML).
The Simplified Molecular Input Line Entry System (SMILES) is a specification in the form of a line notation for describing the structure of chemical species using short ASCII strings. SMILES strings can be imported by most molecule editors for conversion back into two-dimensional drawings or three-dimensional models of the molecules.
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Free open-source: Java 3D applet or standalone program: Ovito: MM XRD EM MD: Free open-source: Python [13] [14] PyMOL: MM XRD SMI EM: Open-source [15] Python [16] [self-published source?] According to the author, almost 1/4 of all published images of 3D protein structures in the scientific literature were made via PyMOL. [citation needed ...