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  2. File:Circular Permutation in Proteins - journal.pcbi.1002445.pdf

    en.wikipedia.org/wiki/File:Circular_Permutation...

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  3. Circular permutation in proteins - Wikipedia

    en.wikipedia.org/wiki/Circular_permutation_in...

    Two examples of frequently used methods that have problems correctly aligning proteins related by circular permutation are dynamic programming and many hidden Markov models. [34] As an alternative to these, a number of algorithms are built on top of non-linear approaches and are able to detect topology -independent similarities, or employ ...

  4. Cyclic permutation - Wikipedia

    en.wikipedia.org/wiki/Cyclic_permutation

    A cyclic permutation consisting of a single 8-cycle. There is not widespread consensus about the precise definition of a cyclic permutation. Some authors define a permutation σ of a set X to be cyclic if "successive application would take each object of the permuted set successively through the positions of all the other objects", [1] or, equivalently, if its representation in cycle notation ...

  5. Cyclic order - Wikipedia

    en.wikipedia.org/wiki/Cyclic_order

    There are a few equivalent ways to state this definition. A cyclic order on X is the same as a permutation that makes all of X into a single cycle, which is a special type of permutation - a circular permutation. Alternatively, a cycle with n elements is also a Z n-torsor: a set with a free transitive action by a finite cyclic group. [1]

  6. Circular permutation - Wikipedia

    en.wikipedia.org/?title=Circular_permutation&...

    This page was last edited on 14 October 2006, at 19:52 (UTC).; Text is available under the Creative Commons Attribution-ShareAlike 4.0 License; additional terms may apply.

  7. Pólya enumeration theorem - Wikipedia

    en.wikipedia.org/wiki/Pólya_enumeration_theorem

    The set X may represent a finite set of beads, and G may be a chosen group of permutations of the beads. For example, if X is a necklace of n beads in a circle, then rotational symmetry is relevant so G is the cyclic group C n, while if X is a bracelet of n beads in a circle, rotations and reflections are relevant so G is the dihedral group D n ...

  8. Category:Permutations - Wikipedia

    en.wikipedia.org/wiki/Category:Permutations

    Parity of a permutation; Permanent (mathematics) Permutable prime; Permutation (music) Permutation automaton; Permutation box; Permutation matrix; Permutation polynomial; Permutoassociahedron; Permutohedron; Place-permutation action; Plain hunt; Pseudorandom permutation

  9. Steinhaus–Johnson–Trotter algorithm - Wikipedia

    en.wikipedia.org/wiki/Steinhaus–Johnson...

    The ! permutations of the numbers from 1 to may be placed in one-to-one correspondence with the ! numbers from 0 to ! by pairing each permutation with the sequence of numbers that count the number of positions in the permutation that are to the right of value and that contain a value less than (that is, the number of inversions for which is the ...