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Client-side Javascript SVG viewer for annotated rooted trees. Also supports phylogenetic networks. Iroki [5] Automatic customization and visualization of phylogenetic trees. iTOL - interactive Tree Of Life [6] annotate trees with various types of data and export to various graphical formats; scriptable through a batch interface. Microreact [7]
The idea of a tree of life arose from ancient notions of a ladder-like progression from lower into higher forms of life (such as in the Great Chain of Being).Early representations of "branching" phylogenetic trees include a "paleontological chart" showing the geological relationships among plants and animals in the book Elementary Geology, by Edward Hitchcock (first edition: 1840).
MNHN-Tree-Tools. MNHN-Tree-Tools is an opensource phylogenetics inference software working on nucleic and protein sequences. Clustering of DNA or protein sequences and phylogenetic tree inference from a set of sequences. At the core it employs a distance-density based approach.
Radial tree. A radial tree, or radial map, is a method of displaying a tree structure (e.g., a tree data structure) in a way that expands outwards, radially. It is one of many ways to visually display a tree, [2][3] with examples dating back to the early 20th century. [4] In use, it is a type of information graphic.
In information visualization and computing, treemapping is a method for displaying hierarchical data using nested figures, usually rectangles. Treemaps display hierarchical (tree-structured) data as a set of nested rectangles. Each branch of the tree is given a rectangle, which is then tiled with smaller rectangles representing sub-branches.
Cladogram. A horizontal cladogram, with the root to the left. Two vertical cladograms, the root at the bottom. A cladogram (from Greek clados "branch" and gramma "character") is a diagram used in cladistics to show relations among organisms. A cladogram is not, however, an evolutionary tree because it does not show how ancestors are related to ...
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