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The DNA sequence that a transcription factor binds to is called a transcription factor-binding site or response element. [62] Transcription factors interact with their binding sites using a combination of electrostatic (of which hydrogen bonds are a special case) and Van der Waals forces. Due to the nature of these chemical interactions, most ...
A transcription factor is a protein that binds to specific DNA sequences (enhancer or promoter), either alone or with other proteins in a complex, to control the rate of transcription of genetic information from DNA to messenger RNA by promoting (serving as an activator) or blocking (serving as a repressor) the recruitment of RNA polymerase.
The transferred DNA (called T-DNA) is piloted to the plant cell nucleus by nuclear localization signals present in the Agrobacterium protein VirD2, which is covalently attached to the end of the T-DNA at the Right border (RB). Exactly how the T-DNA is integrated into the host plant genomic DNA is an active area of plant biology research.
An active enhancer regulatory region of DNA is enabled to interact with the promoter DNA region of its target gene by the formation of a chromosome loop. This can initiate messenger RNA (mRNA) synthesis by RNA polymerase II (RNAP II) bound to the promoter at the transcription start site of the gene. The loop is stabilized by one architectural ...
Horizontal gene transfer is a potential confounding factor in inferring phylogenetic trees based on the sequence of one gene. [163] For example, given two distantly related bacteria that have exchanged a gene a phylogenetic tree including those species will show them to be closely related because that gene is the same even though most other ...
transcription factor – a substance, such as a protein, that contributes to the cause of a specific biochemical reaction or bodily process; promoter – a region of DNA that initiates transcription of a particular gene; Sigma factor – specialized bacterial co-factors that complex with RNA Polymerase and encode sequence specificity
Natural competence is the ability of a cell to bind to and transport extracellular DNA through the membrane and recombine foreign genes into its own DNA through a process called transformation. [2] Horizontal gene transfer is a result of this, where bacterial genes can be transferred amongst same-generation species in a given environment, and ...
The initiation of gene transcription in eukaryotes occurs in specific steps. [1] First, an RNA polymerase along with general transcription factors binds to the promoter region of the gene to form a closed complex called the preinitiation complex. The subsequent transition of the complex from the closed state to the open state results in the ...