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In computer science, the longest palindromic substring or longest symmetric factor problem is the problem of finding a maximum-length contiguous substring of a given string that is also a palindrome. For example, the longest palindromic substring of "bananas" is "anana". The longest palindromic substring is not guaranteed to be unique; for ...
The variable z is used to hold the length of the longest common substring found so far. The set ret is used to hold the set of strings which are of length z. The set ret can be saved efficiently by just storing the index i, which is the last character of the longest common substring (of size z) instead of S[(i-z+1)..i].
In computer science a palindrome tree, also called an EerTree, [1] is a type of search tree, that allows for fast access to all palindromes contained in a string.They can be used to solve the longest palindromic substring, the k-factorization problem [2] (can a given string be divided into exactly k palindromes), palindromic length of a string [3] (what is the minimum number of palindromes ...
A longest common subsequence (LCS) is the longest subsequence common to all sequences in a set of sequences (often just two sequences). It differs from the longest common substring : unlike substrings, subsequences are not required to occupy consecutive positions within the original sequences.
This is a list of some of the more commonly known problems that are NP-complete when expressed as decision problems. As there are thousands of such problems known, this list is in no way comprehensive. Many problems of this type can be found in Garey & Johnson (1979).
Finding the longest repeated substring; Finding the longest common substring; Finding the longest palindrome in a string; Suffix trees are often used in bioinformatics applications, searching for patterns in DNA or protein sequences (which can be viewed as long strings of characters). The ability to search efficiently with mismatches might be ...
The longest repeated substring problem for a string of length can be solved in () time using both the suffix array and the LCP array. It is sufficient to perform a linear scan through the LCP array in order to find its maximum value v m a x {\displaystyle v_{max}} and the corresponding index i {\displaystyle i} where v m a x {\displaystyle v ...
The longest common subsequence of sequences 1 and 2 is: LCS (SEQ 1,SEQ 2) = CGTTCGGCTATGCTTCTACTTATTCTA. This can be illustrated by highlighting the 27 elements of the longest common subsequence into the initial sequences: SEQ 1 = A CG G T G TCG T GCTATGCT GA T G CT G ACTTAT A T G CTA SEQ 2 = CGTTCGGCTAT C G TA C G TTCTA TT CT A T G ATT T CTA A