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  2. List of neuroscience databases - Wikipedia

    en.wikipedia.org/wiki/List_of_neuroscience_databases

    Structural MRI images Human Macroscopic MRI datasets Healthy and Alzheimer's disease: Yes [4] Big Brain 3D reconstruction of complete brain from cell-body stained histology sections at 20 micron isotropic resolution Human Microscopic Images Healthy No [5] BIRN fMRI and MRI data fMRI, MRI scans and atlases for human and mouse brains Mouse, Human

  3. FMRIB Software Library - Wikipedia

    en.wikipedia.org/wiki/FMRIB_Software_Library

    The FMRIB Software Library, abbreviated FSL, is a software library containing image analysis and statistical tools for functional, structural and diffusion MRI brain imaging data. FSL is available as both precompiled binaries and source code for Apple and PC computers. It is freely available for non-commercial use.

  4. Medical image computing - Wikipedia

    en.wikipedia.org/wiki/Medical_image_computing

    The simplest approach is to model medical images as deformed versions of a single template image. For example, anatomical MRI brain scans are often mapped to the MNI template [35] as to represent all the brain scans in common coordinates. The main drawback of a single-template approach is that if there are significant differences between the ...

  5. List of neuroimaging software - Wikipedia

    en.wikipedia.org/wiki/List_of_neuroimaging_software

    Neuroimaging software is used to study the structure and function of the brain. To see an NIH Blueprint for Neuroscience Research funded clearinghouse of many of these software applications, as well as hardware, etc. go to the NITRC web site. 3D Slicer Extensible, free open source multi-purpose software for visualization and analysis.

  6. Insight Segmentation and Registration Toolkit - Wikipedia

    en.wikipedia.org/wiki/Insight_Segmentation_and...

    ITK is an open-source software toolkit for performing registration and segmentation. Segmentation is the process of identifying and classifying data found in a digitally sampled representation. Typically the sampled representation is an image acquired from such medical instrumentation as CT or MRI scanners. Registration is the task of aligning ...

  7. List of datasets for machine-learning research - Wikipedia

    en.wikipedia.org/wiki/List_of_datasets_for...

    Photorealistic retinal images and vessel segmentations. Public domain. 2500 images with 1500*1152 pixels useful for segmentation and classification of veins and arteries on a single background. 2500 Images Classification, Segmentation 2020 [261] C. Valenti et al. EEG Database Study to examine EEG correlates of genetic predisposition to alcoholism.

  8. Allen Brain Atlas - Wikipedia

    en.wikipedia.org/wiki/Allen_Brain_Atlas

    The Allen Brain Atlas lets researchers view the areas of differing expression in the brain which enables the viewing of neural connections throughout the brain. Viewing these pathways through differing gene expression as well as functional imaging techniques permits researchers to correlate between gene expression, cell types, and pathway ...

  9. Amira (software) - Wikipedia

    en.wikipedia.org/wiki/Amira_(Software)

    Amira (ah-MEER-ah) is a software platform for visualization, processing, and analysis of 3D and 4D data. It is being actively developed by Thermo Fisher Scientific in collaboration with the Zuse Institute Berlin (ZIB), and commercially distributed by Thermo Fisher Scientific — together with its sister software Avizo.