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PyCharm was released to the market of the Python-focused IDEs to compete with PyDev (for Eclipse) or the more broadly focused Komodo IDE by ActiveState. [ citation needed ] The beta version of the product was released in July 2010, with the 1.0 arriving 3 months later.
FastQC can be run as a stand-alone application or it can be integrated into a larger pipeline solution. fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data.
Some tools also support CellML, a standard used for representing physiological processes. The advantage of using standard formats is that even though a particular software application may eventually become unsupported and even unusable, the models developed by that application can be easily transferred to more modern equivalents.
SageMath, a combination of more than 20 main opensource math packages and provides easy to use web interface with the help of Python; Salt, a configuration management and remote execution engine; SCons, a tool for building software; Shinken, a computer system and network monitoring software application compatible with Nagios
Anaconda is an open source [9] [10] data science and artificial intelligence distribution platform for Python and R programming languages.Developed by Anaconda, Inc., [11] an American company [1] founded in 2012, [11] the platform is used to develop and manage data science and AI projects. [9]
Salt (sometimes referred to as SaltStack) is a Python-based, open-source software for event-driven IT automation, remote task execution, and configuration management. Supporting the " infrastructure as code " approach to data center system and network deployment and management, configuration automation, SecOps orchestration, vulnerability ...
LOCtarget is a tool for predicting, and a database of pre-computed predictions for, sub-cellular localization of eukaryotic and prokaryotic proteins. Several methods are employed to make the predictions, including text analysis of SWISS-PROT keywords, nuclear localization signals, and the use of neural networks. (bio.tools entry) [41]
It ships with most Linux distributions, [229] AmigaOS 4 (using Python 2.7), FreeBSD (as a package), NetBSD, and OpenBSD (as a package) and can be used from the command line (terminal). Many Linux distributions use installers written in Python: Ubuntu uses the Ubiquity installer, while Red Hat Linux and Fedora Linux use the Anaconda installer.