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Within computational biology, an MA plot is an application of a Bland–Altman plot for visual representation of genomic data. The plot visualizes the differences between measurements taken in two samples, by transforming the data onto M (log ratio) and A (mean average) scales, then plotting these values.
DESeq2 is a software package in the field of bioinformatics and computational biology for the statistical programming language R. It is primarily employed for the analysis of high-throughput RNA sequencing (RNA-seq) data to identify differentially expressed genes between different experimental conditions.
fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.
The following list contains syntax examples of how a range of element of an array can be accessed. In the following table: first – the index of the first element in the slice
In morphology and lexicography, a lemma is the canonical form of a set of words. In English , for example, run , runs , ran , and running are forms of the same lexeme , so we can select one of them; ex. run , to represent all the forms.
Second normal form (2NF), in database normalization, is a normal form. A relation is in the second normal form if it fulfills the following two requirements: It is in first normal form. It does not have any non-prime attribute that is functionally dependent on any proper subset of any candidate key of the relation (i.e. it lacks partial ...
Donald Trump’s pick for defense secretary, Pete Hegseth, said gay people should be able to serve in the US military, in an apparent shift from his previous stance on the issue.
To quantile normalize two or more distributions to each other, without a reference distribution, sort as before, then set to the average (usually, arithmetic mean) of the distributions. So the highest value in all cases becomes the mean of the highest values, the second highest value becomes the mean of the second highest values, and so on.