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  2. DNA annotation - Wikipedia

    en.wikipedia.org/wiki/DNA_annotation

    Museum model: Manual curation by experts is involved to interpret the results of an annotation project. Cottage industry model: Annotation is decentralized and is the result of the effort from different part-time curators. Party or jamboree model: Consists of a short intensive workshop with leading curators from the community. It was first used ...

  3. Bioconductor - Wikipedia

    en.wikipedia.org/wiki/Bioconductor

    In addition there are many genome annotation packages available that are mainly, but not solely, oriented towards different types of microarrays. The project was started in the Fall of 2001 and is overseen by the Bioconductor core team, based primarily at the Fred Hutchinson Cancer Research Center , with other members coming from international ...

  4. ANNOVAR - Wikipedia

    en.wikipedia.org/wiki/ANNOVAR

    Especially, gene-based annotation will highlight the exact amino acid change if the mutation is in the exonic region and the predicted effect on the function of the known gene. This approach is useful for identifying variants in known genes from Whole Exome Sequencing data.

  5. Genomic annotation - Wikipedia

    en.wikipedia.org/wiki/Genomic_annotation

    Genomic annotation can refer to: DNA annotation; SNP annotation; See also. Vertebrate Genome Annotation Project This page was last edited on 16 ...

  6. Integrated Microbial Genomes System - Wikipedia

    en.wikipedia.org/wiki/Integrated_Microbial...

    The Integrated Microbial Genomes (IMG) system is a genome browsing and annotation platform developed by the U.S. Department of Energy (DOE)-Joint Genome Institute. [2] [3] IMG contains all the draft and complete microbial genomes sequenced by the DOE-JGI integrated with other publicly available genomes (including Archaea, Bacteria, Eukarya, Viruses and Plasmids).

  7. Consensus CDS Project - Wikipedia

    en.wikipedia.org/wiki/Consensus_CDS_Project

    The Consensus Coding Sequence (CCDS) Project is a collaborative effort to maintain a dataset of protein-coding regions that are identically annotated on the human and mouse reference genome assemblies. The CCDS project tracks identical protein annotations on the reference mouse and human genomes with a stable identifier (CCDS ID), and ensures ...

  8. BASys - Wikipedia

    en.wikipedia.org/wiki/BASys

    BASys (Bacterial Annotation System) is a freely available web server that can be used to perform automated, comprehensive annotation of bacterial genomes. [2] With the advent of next generation DNA sequencing it is now possible to sequence the complete genome of a bacterium (typically ~4 million bases) within a single day.

  9. GENCODE - Wikipedia

    en.wikipedia.org/wiki/GENCODE

    GENCODE is a scientific project in genome research and part of the ENCODE (ENCyclopedia Of DNA Elements) scale-up project.. The GENCODE consortium was initially formed as part of the pilot phase of the ENCODE project to identify and map all protein-coding genes within the ENCODE regions (approx. 1% of Human genome). [2]