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  2. Enhancer (genetics) - Wikipedia

    en.wikipedia.org/wiki/Enhancer_(genetics)

    In genetics, an enhancer is a short (50–1500 bp) region of DNA that can be bound by proteins to increase the likelihood that transcription of a particular gene will occur. [1] [2] These proteins are usually referred to as transcription factors. Enhancers are cis-acting. They can be located up to 1 Mbp (1,000,000 bp) away from the gene ...

  3. DNA footprinting - Wikipedia

    en.wikipedia.org/wiki/DNA_footprinting

    The regulation of transcription has been studied extensively, and yet there is still much that is unknown. Transcription factors and associated proteins that bind promoters, enhancers, or silencers to drive or repress transcription are fundamental to understanding the unique regulation of individual genes within the genome. Techniques like DNA ...

  4. Enhancer RNA - Wikipedia

    en.wikipedia.org/wiki/Enhancer_RNA

    Bidirectional transcription at enhancer sites generates comparatively shorter (0.5-2kb) and non-polyadenylated eRNAs. Enhancers that generate polyA- eRNAs have a chromatin signature with a higher H3K4me1/me3 ratio than 1D-eRNAs. In general, enhancer transcription and production of bidirectional eRNAs demonstrate a strong correlation of enhancer ...

  5. STARR-seq - Wikipedia

    en.wikipedia.org/wiki/STARR-seq

    In eukaryotes, transcription is regulated by sequence-specific DNA-binding proteins (transcription factors) associated with a gene’s promoter and also by distant control sequences including enhancers. Enhancers are non-coding DNA sequences, containing several binding sites for a variety of transcription factors. [2]

  6. Transcription (biology) - Wikipedia

    en.wikipedia.org/wiki/Transcription_(biology)

    An enhancer localized in a DNA region distant from the promoter of a gene can have a very large effect on gene transcription, with some genes undergoing up to 100-fold increased transcription due to an activated enhancer. [10] Enhancers are regions of the genome that are major gene-regulatory elements.

  7. Primary transcript - Wikipedia

    en.wikipedia.org/wiki/Primary_transcript

    Activation of transcription depends on whether or not the transcription elongation complex, itself consisting of a variety of transcription factors, can induce RNA polymerase to dissociate from the Mediator complex that connects an enhancer region to the promoter. [4] Role of transcription factors and enhancers in gene expression regulation

  8. Enhanceosome - Wikipedia

    en.wikipedia.org/wiki/Enhanceosome

    As a result, the enhanceosome also recruits non histone architectural transcription factors, called high-mobility group (HMG) proteins, which are responsible for regulating chromatin structure. [3] These factors do not bind to the enhancer, but instead are used to restructure the DNA to ensure that the genes can be accessed by the transcription ...

  9. Cis-regulatory element - Wikipedia

    en.wikipedia.org/wiki/Cis-regulatory_element

    Multiple enhancers can act in a coordinated fashion to regulate transcription of one gene. [7] A number of genome-wide sequencing projects have revealed that enhancers are often transcribed to long non-coding RNA (lncRNA) or enhancer RNA (eRNA), whose changes in levels frequently correlate with those of the target gene mRNA. [8]

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