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  2. List of phylogenetic tree visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetic_tree...

    Simple Java tree viewer able to read newick and nexus tree files. Can be used to color branches and produce vector artwork. All [24] JEvTrace A multivalent browser for sequence alignment, phylogeny, and structure. Performs an interactive Evolutionary Trace [25] and other phylogeny-inspired analysis. All [26] MEGA

  3. Arlequin (software) - Wikipedia

    en.wikipedia.org/wiki/Arlequin_(software)

    Arlequin is a free population genetics software distributed as an integrated GUI data analysis software. [1] It performs several types of tests and calculations, including Fixation index (F st, also known as the "F-statistics" [2]), computing genetic distance, Hardy–Weinberg equilibrium, linkage disequilibrium, analysis of molecular variance, mismatch distribution, and pairwise difference tests.

  4. Cream gene - Wikipedia

    en.wikipedia.org/wiki/Cream_gene

    A single copy of the allele has minimal impact on eye color, but when two copies are present, a horse will be blue-eyed in addition to a light coat color. The cream gene is one of several hypomelanism or dilution genes identified in horses. Therefore, it is not always possible to tell by color alone whether the C Cr allele is present without a ...

  5. Dilution gene - Wikipedia

    en.wikipedia.org/wiki/Dilution_gene

    Equine coat color genetics discusses color genes in horses, including a brief description of dilution genes; Equine coat color describes various colors in horses; Cream gene, describes the process for horses by which the cremello, perlino, smoky cream double-dilute colors are created as well as the buckskin, palomino and smoky black single ...

  6. Silver dapple gene - Wikipedia

    en.wikipedia.org/wiki/Silver_dapple_gene

    The silver or silver dapple (Z) gene is a dilution gene that affects the black base coat color and is associated with Multiple Congenital Ocular Abnormalities. It will typically dilute a black mane and tail to a silvery gray or flaxen color, and a black body to a chocolaty brown, sometimes with dapples. [1]

  7. Equine coat color genetics - Wikipedia

    en.wikipedia.org/wiki/Equine_coat_color_genetics

    "Horse coat color tests" from the UC Davis Veterinary Genetics Lab "Introduction to Coat Color Genetics" from Veterinary Genetics Laboratory, School of Veterinary Medicine, University of California, Davis. Web Site accessed January 12, 2008 "Horse Color Calculator" Archived 2016-12-12 at the Wayback Machine From Animal Genetics Incorporated ...

  8. BLUPF90 - Wikipedia

    en.wikipedia.org/wiki/BLUPF90

    The BLUPF90 family of programs is a statistical software package used in quantitative genetics for animal and plant breeding. [1] [2] It can fit mixed models using restricted maximum likelihood as well as Gibbs sampling to estimate variance components, and predict breeding values via best linear unbiased prediction (BLUP).

  9. Leopard complex - Wikipedia

    en.wikipedia.org/wiki/Leopard_complex

    The spots are usually the same color as the horse's base color. [10] Leopard: Considered an extension of a blanket to cover the whole body. A white horse with dark spots that flow out over the entire body. [11] Few Spot Leopard: A mostly white horse with a bit of color remaining around the flank, neck and head. [11] Snowflake