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The longest alternating subsequence problem has also been studied in the setting of online algorithms, in which the elements of are presented in an online fashion, and a decision maker needs to decide whether to include or exclude each element at the time it is first presented, without any knowledge of the elements that will be presented in the future, and without the possibility of recalling ...
This subsequence has length six; the input sequence has no seven-member increasing subsequences. The longest increasing subsequence in this example is not the only solution: for instance, 0, 4, 6, 9, 11, 15 0, 2, 6, 9, 13, 15 0, 4, 6, 9, 13, 15. are other increasing subsequences of equal length in the same input sequence.
A suffix tree of the letters ATCGATCGA$ In computer science, the longest repeated substring problem is the problem of finding the longest substring of a string that occurs at least twice.
The final result is that the last cell contains all the longest subsequences common to (AGCAT) and (GAC); these are (AC), (GC), and (GA). The table also shows the longest common subsequences for every possible pair of prefixes. For example, for (AGC) and (GA), the longest common subsequence are (A) and (G).
There is no similar relationship between shortest common supersequences and longest common subsequences of three or more input sequences. (In particular, LCS and SCS are not dual problems .) However, both problems can be solved in O ( n k ) {\displaystyle O(n^{k})} time using dynamic programming, where k {\displaystyle k} is the number of ...
Maximum subarray problems arise in many fields, such as genomic sequence analysis and computer vision.. Genomic sequence analysis employs maximum subarray algorithms to identify important biological segments of protein sequences that have unusual properties, by assigning scores to points within the sequence that are positive when a motif to be recognized is present, and negative when it is not ...
Take the sequence of matrices and separate it into two subsequences. Find the minimum cost of multiplying out each subsequence. Add these costs together, and add in the cost of multiplying the two result matrices. Do this for each possible position at which the sequence of matrices can be split, and take the minimum over all of them.
The earliest known example of a de Bruijn sequence comes from Sanskrit prosody where, since the work of Pingala, each possible three-syllable pattern of long and short syllables is given a name, such as 'y' for short–long–long and 'm' for long–long–long.