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Termination requires that the progress of the DNA replication fork must stop or be blocked. Termination at a specific locus, when it occurs, involves the interaction between two components: (1) a termination site sequence in the DNA, and (2) a protein which binds to this sequence to physically stop DNA replication.
Slipped strand mispairing (SSM, also known as replication slippage) is a mutation process which occurs during DNA replication. It involves denaturation and displacement of the DNA strands, resulting in mispairing of the complementary bases. Slipped strand mispairing is one explanation for the origin and evolution of repetitive DNA sequences. [1]
During DNA replication, the replisome will unwind the parental duplex DNA into a two single-stranded DNA template replication fork in a 5' to 3' direction. The leading strand is the template strand that is being replicated in the same direction as the movement of the replication fork.
In genetics, a transcription terminator is a section of nucleic acid sequence that marks the end of a gene or operon in genomic DNA during transcription.This sequence mediates transcriptional termination by providing signals in the newly synthesized transcript RNA that trigger processes which release the transcript RNA from the transcriptional complex.
Overview of transcription process. Termination of transcription occurs due to termination signal. In molecular biology, a termination signal is a sequence that signals the end of transcription or translation. [1] Termination signals are found at the end of the part of the chromosome being transcribed during transcription of mRNA.
Image showing the formation of a DNA stem-loop (hairpin loop) DNA replication slippage occurs when the replication machinery encounters a repetitive sequence, such as a trinucleotide repeat region. [9] The repetitive nature of these sequences can present challenges during replication, as the template and newly synthesized strands can misalign.
RCR begins when the initiator protein nicks a DNA strand at a specific sequence in the replication origin region. This is done through a transesterification reaction that forms a 5′-phosphate bond that connects the DNA to the active-site tyrosine and frees the 3′-end hydroxyl (3′-OH) adjacent to the nick site.
The temporal order of replication of all the segments in the genome, called its replication-timing program, can now be easily measured in two different ways. [1] One way simply measures the amount of the different DNA sequences along the length of the chromosome per cell.