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  2. Somatic evolution in cancer - Wikipedia

    en.wikipedia.org/wiki/Somatic_evolution_in_cancer

    Early mathematical modeling of cancer, by Armitage and Doll, set the stage for the future development of the somatic evolutionary theory of cancer. Armitage and Doll explained the cancer incidence data, as a function of age, as a process of the sequential accumulation of somatic mutations (or other rate limiting steps). [13]

  3. Phylogenetics - Wikipedia

    en.wikipedia.org/wiki/Phylogenetics

    In biology, phylogenetics (/ ˌ f aɪ l oʊ dʒ ə ˈ n ɛ t ɪ k s,-l ə-/) [1] [2] [3] is the study of the evolutionary history of life using genetics, which is known as phylogenetic inference. It establishes the relationship between organisms with the empirical data and observed heritable traits of DNA sequences, protein amino acid sequences ...

  4. Tumour heterogeneity - Wikipedia

    en.wikipedia.org/wiki/Tumour_heterogeneity

    The cancer stem cell model asserts that within a population of tumour cells, there is only a small subset of cells that are tumourigenic (able to form tumours). These cells are termed cancer stem cells (CSCs), and are marked by the ability to both self-renew and differentiate into non-tumourigenic progeny. The CSC model posits that the ...

  5. List of databases for oncogenomic research - Wikipedia

    en.wikipedia.org/wiki/List_of_databases_for_onco...

    Project Data Sphere from The CEO Life Sciences Consortium allows researchers to share, integrate, and analyze de-identified patient-level, comparator arm, phase III cancer data. →: The CEO Life Sciences Consortium, United States Various No Yes Human No Yes Yes Catalogue Of Somatic Mutations In Cancer (COSMIC) →: Wellcome Trust Sanger ...

  6. List of phylogenetics software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetics_software

    Explore, manipulate, analyze, and simulate phylogenetic objects (alignments, trees, and MCMC logs) J.W. Brown, J.F. Walker, and S.A. Smith POY A phylogenetic analysis program that supports multiple kinds of data and can perform alignment and phylogeny inference. A variety of heuristic algorithms have been developed for this purpose

  7. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    The Cancer Genome Atlas (TCGA): provides data from hundreds of cancer samples obtained using high-throughput techniques such as gene expression profiling, copy number variation profiling, SNP genotyping, genome-wide DNA methylation profiling, microRNA profiling, and exon sequencing of at least 1,200 genes

  8. Molecular phylogenetics - Wikipedia

    en.wikipedia.org/wiki/Molecular_phylogenetics

    The result of a molecular phylogenetic analysis is expressed in a phylogenetic tree. Molecular phylogenetics is one aspect of molecular systematics, a broader term that also includes the use of molecular data in taxonomy and biogeography. [3] [4] [5] Molecular phylogenetics and molecular evolution correlate. Molecular evolution is the process ...

  9. COSMIC cancer database - Wikipedia

    en.wikipedia.org/wiki/COSMIC_cancer_database

    The COSMIC (Catalogue of Somatic Mutations in Cancer) database was designed to collect and display information on somatic mutations in cancer. It was launched in 2004, with data from just four genes, HRAS, KRAS2, NRAS and BRAF. [6] These four genes are known to be somatically mutated in cancer. Since its creation, the database has expanded rapidly.