Ad
related to: phylogenetics of cancer data mining tools software download
Search results
Results from the WOW.Com Content Network
MNHN-Tree-Tools is an opensource phylogenetics inference software working on nucleic and protein sequences. Clustering of DNA or protein sequences and phylogenetic tree inference from a set of sequences. At the core it employs a distance-density based approach. Thomas Haschka, Loïc Ponger, Christophe Escudé and Julien Mozziconacci [28 ...
Tool to design and execute workflows Linux, macOS, Windows: LGPL: myGrid: T-REX (web server) Inference, validation and visualization of phylogenetic trees and phylogenetic networks Web browser, Windows: GNU (GPL) v3 Université du Québec à Montréal [7] UGENE: Integrated bioinformatics tools, written in C++ Linux, macOS, Windows: GPL 2 Unipro ...
Phylogenetic inference and data visualization for allelic/SNP sequences profiles using Minimum Spanning Trees: All [29] SplitsTree: Software for viewing trees, cladograms, NeighborNets, and other graphs All [30] TreeDyn Open-source software for tree manipulation and annotation allowing incorporation of meta information: All [31] Treevolution
Mesquite also contains tools for simulating data such as species trees, gene trees, and DNA matrices. The base distribution of Mesquite affords interoperability with other programs, for such purposes as multiple sequence alignment (e.g. Clustal and MAFFT ), as well as the ability to retrieve DNA sequence data from GenBank .
Molecular Evolutionary Genetics Analysis (MEGA) is computer software for conducting statistical analysis of molecular evolution and for constructing phylogenetic trees. It includes many sophisticated methods and tools for phylogenomics and phylomedicine. It is licensed as proprietary freeware.
PHYLogeny Inference Package (PHYLIP) is a free computational phylogenetics package of programs for inferring evolutionary trees (phylogenies). [1] It consists of 65 portable programs, i.e., the source code is written in the programming language C.
The data can be stored both locally (on a personal computer) and on a shared storage (e.g., a lab database). UGENE integrates dozens of well-known biological tools, algorithms, and original tools in the context of genomics, evolutionary biology, virology, and other branches of life science.
A related project is LinguaPhylo (LPhy). [5] LPhy is a probabilistic programming language for defining phylogenetic analyses with a syntax similar to OpenBUGS.It provides a way to generate BEAST 2 XML files (and similar model specifications for other phylogenetics packages) without needing to write the XML by hand.
Ad
related to: phylogenetics of cancer data mining tools software download