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  2. Batch normalization - Wikipedia

    en.wikipedia.org/wiki/Batch_normalization

    In a neural network, batch normalization is achieved through a normalization step that fixes the means and variances of each layer's inputs. Ideally, the normalization would be conducted over the entire training set, but to use this step jointly with stochastic optimization methods, it is impractical to use the global information.

  3. Normalization (machine learning) - Wikipedia

    en.wikipedia.org/wiki/Normalization_(machine...

    Data normalization (or feature scaling) includes methods that rescale input data so that the features have the same range, mean, variance, or other statistical properties. For instance, a popular choice of feature scaling method is min-max normalization , where each feature is transformed to have the same range (typically [ 0 , 1 ...

  4. Batch effect - Wikipedia

    en.wikipedia.org/wiki/Batch_effect

    Multiple definitions of the term "batch effect" have been proposed in the literature. Lazar et al. (2013) noted, "Providing a complete and unambiguous definition of the so-called batch effect is a challenging task, especially because its origins and the way it manifests in the data are not completely known or not recorded."

  5. Feature scaling - Wikipedia

    en.wikipedia.org/wiki/Feature_scaling

    Without normalization, the clusters were arranged along the x-axis, since it is the axis with most of variation. After normalization, the clusters are recovered as expected. In machine learning, we can handle various types of data, e.g. audio signals and pixel values for image data, and this data can include multiple dimensions. Feature ...

  6. DESeq2 - Wikipedia

    en.wikipedia.org/wiki/DESeq2

    DESeq2 is a software package in the field of bioinformatics and computational biology for the statistical programming language R.It is primarily employed for the analysis of high-throughput RNA sequencing (RNA-seq) data to identify differentially expressed genes between different experimental conditions.

  7. List of research methods in biology - Wikipedia

    en.wikipedia.org/wiki/List_of_research_methods...

    This list of research methods in biology is an index to articles about research methodologies used in various branches of biology. Research design and analysis

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  9. Microarray analysis techniques - Wikipedia

    en.wikipedia.org/wiki/Microarray_analysis_techniques

    Example of an approximately 40,000 probe spotted oligo microarray with enlarged inset to show detail. Microarray analysis techniques are used in interpreting the data generated from experiments on DNA (Gene chip analysis), RNA, and protein microarrays, which allow researchers to investigate the expression state of a large number of genes – in many cases, an organism's entire genome – in a ...