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NetPrimer is a gratis web-based tool used for analysing primers used in PCR to amplify a DNA sequence. [2] The software predicts the melting temperature of the primers using the nearest neighbor thermodynamic algorithm.
Because almost all water bodies are dynamic in their composition, the relevant quality parameters are typically expressed as a range of expected concentrations. They include the natural and man-made chemical , biological and microbiological characteristics of rivers , lakes and ground-waters , the ways they are measured and the ways that they ...
Melting curve analysis is an assessment of the dissociation characteristics of double-stranded DNA during heating. As the temperature is raised, the double strand begins to dissociate leading to a rise in the absorbance intensity, hyperchromicity. The temperature at which 50% of DNA is denatured is known as the melting temperature. Measurement ...
Due to the sensitivity of high-resolution melting analysis, it is necessary to carefully consider PCR cycling conditions, template DNA quality, and melting curve parameters. [12] For accurate and repeatable results, PCR thermal cycling conditions must be optimized to ensure that the desired DNA region is amplified with high specificity and ...
The bulk compounds should be contrasted with nanoparticles which exhibit melting-point depression, meaning that they have significantly lower melting points than the bulk material, and correspondingly lower Tammann and Hüttig temperatures. [4] For instance, 2 nm gold nanoparticles melt at only about 327 °C, in contrast to 1065 °C for a bulk ...
Wastewater quality indicators are laboratory test methodologies to assess suitability of wastewater for disposal, treatment or reuse. The main parameters in sewage that are measured to assess the sewage strength or quality as well as treatment options include: solids, indicators of organic matter, nitrogen, phosphorus, indicators of fecal ...
It is fast (through use of a genome's FM-index) and can account for primer melting temperature and tolerated edit distances between primers and hit locations on the genome. VPCR [ 3 ] runs a dynamic simulation of multiplex PCR, allowing for an estimate of quantitative competition effects between multiple amplicons in one reaction.
A biotic index is a scale for showing the quality of an environment by indicating the types and abundances of organisms present in a representative sample of the environment. It is often used to assess the quality of water in marine and freshwater ecosystems.