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  2. List of systems biology modeling software - Wikipedia

    en.wikipedia.org/wiki/List_of_systems_biology...

    First GUI based application to support scripting in systems biology modeling. Object Pascal: Yes: 2000 JSim [71] First Java-based systems biology modeling platform: Java: Yes: 2003 MetaMod [72] One of the first PC-based systems biology simulators: BBC Micro: No: 1986 MetaModel [73] Early PC-based systems biology simulator: Turbo Pascal 5.0: No ...

  3. List of reagents - Wikipedia

    en.wikipedia.org/wiki/List_of_reagents

    an organosulfur compound; an important polar aprotic solvent that dissolves both polar and nonpolar compounds Dioxane: a heterocyclic organic compound; classified as an ether Ethanol: a powerful psychoactive drug; used in alcoholic beverages, in thermometers, as a solvent, and as a fuel Fehling's reagent

  4. Solvent model - Wikipedia

    en.wikipedia.org/wiki/Solvent_model

    In computational chemistry, a solvent model is a computational method that accounts for the behavior of solvated condensed phases. [1] [2] [3] Solvent models enable simulations and thermodynamic calculations applicable to reactions and processes which take place in solution.

  5. TK Solver - Wikipedia

    en.wikipedia.org/wiki/TK_Solver

    TK Solver's core technologies are a declarative programming language, algebraic equation solver, [1] an iterative equation solver, and a structured, object-based interface, using a command structure. [ 1 ] [ 7 ] The interface comprises nine classes of objects that can be shared between and merged into other TK files:

  6. Implicit solvation - Wikipedia

    en.wikipedia.org/wiki/Implicit_solvation

    [5] [6] Notably, solvation energy is the free energy needed to transfer a solute molecule from a solvent to vacuum (gas phase). This energy can supplement the intramolecular energy in vacuum calculated in molecular mechanics. Thus, the needed atomic solvation parameters were initially derived from water-gas partition data. [7]

  7. Extraction (chemistry) - Wikipedia

    en.wikipedia.org/wiki/Extraction_(chemistry)

    An extracting solvent is chosen in which the impurities are insoluble and the desired compound has at least limited solubility. The solvent is refluxed and condensed solvent falls into the thimble and dissolves the desired compound which then passes back through the filter into the flask.

  8. Theta solvent - Wikipedia

    en.wikipedia.org/wiki/Theta_solvent

    B reflects the energy of binary interactions between solvent molecules and segments of polymer chain. When B > 0, the solvent is "good," and when B < 0, the solvent is "poor". For a theta solvent, the second virial coefficient is zero because the excess chemical potential is zero; otherwise it would fall outside the definition of a theta solvent.

  9. Solvent effects - Wikipedia

    en.wikipedia.org/wiki/Solvent_effects

    In chemistry, solvent effects are the influence of a solvent on chemical reactivity or molecular associations. Solvents can have an effect on solubility , stability and reaction rates and choosing the appropriate solvent allows for thermodynamic and kinetic control over a chemical reaction.