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Variational inference; Approximate Bayesian computation; Estimators; Bayesian estimator; Credible interval; Maximum a posteriori estimation; Evidence approximation; Evidence lower bound; Nested sampling; Model evaluation; Bayes factor (Schwarz criterion) Model averaging; Posterior predictive; Mathematics portal
Variational Bayesian methods are a family of techniques for approximating intractable integrals arising in Bayesian inference and machine learning.They are typically used in complex statistical models consisting of observed variables (usually termed "data") as well as unknown parameters and latent variables, with various sorts of relationships among the three types of random variables, as ...
Stan is a probabilistic programming language for statistical inference written in C++ ArviZ a Python library for exploratory analysis of Bayesian models Bambi is a high-level Bayesian model-building interface based on PyMC
The reparameterization trick (aka "reparameterization gradient estimator") is a technique used in statistical machine learning, particularly in variational inference, variational autoencoders, and stochastic optimization.
Empirical Bayes methods can be seen as an approximation to a fully Bayesian treatment of a hierarchical Bayes model.. In, for example, a two-stage hierarchical Bayes model, observed data = {,, …,} are assumed to be generated from an unobserved set of parameters = {,, …,} according to a probability distribution ().
The likelihood estimate needs to be as large as possible; because it's a lower bound, getting closer improves the approximation of the log likelihood. By substituting in the factorized version of , (), parameterized over the hidden nodes as above, is simply the negative relative entropy between and plus other terms independent of if is defined as
Bayesian inference of phylogeny combines the information in the prior and in the data likelihood to create the so-called posterior probability of trees, which is the probability that the tree is correct given the data, the prior and the likelihood model.
Devising a good model for the data is central in Bayesian inference. In most cases, models only approximate the true process, and may not take into account certain factors influencing the data. [2] In Bayesian inference, probabilities can be assigned to model parameters. Parameters can be represented as random variables. Bayesian inference uses ...