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Glossary. v. t. e. AlphaFold is an artificial intelligence (AI) program developed by DeepMind, a subsidiary of Alphabet, which performs predictions of protein structure. [ 1 ] The program is designed as a deep learning system. [ 2 ] AlphaFold software has had three major versions. A team of researchers that used AlphaFold 1 (2018) placed first ...
Artistic, GPL. Open Bioinformatics Foundation. BioPHP. PHP language toolkit with classes for DNA and protein sequence analysis, alignment, database parsing, and other bioinformatics tools. Cross-platform. GPL v2. Open Bioinformatics Foundation. Biopython. Python language toolkit.
Bio-inspired computing, short for biologically inspired computing, is a field of study which seeks to solve computer science problems using models of biology. It relates to connectionism, social behavior, and emergence. Within computer science, bio-inspired computing relates to artificial intelligence and machine learning.
t. e. Machine learning in bioinformatics is the application of machine learning algorithms to bioinformatics, [ 1 ] including genomics, proteomics, microarrays, systems biology, evolution, and text mining. [ 2 ][ 3 ] Prior to the emergence of machine learning, bioinformatics algorithms had to be programmed by hand; for problems such as protein ...
v. t. e. Synthetic biology (SynBio) is a multidisciplinary field of science that focuses on living systems and organisms, and it applies engineering principles to develop new biological parts, devices, and systems or to redesign existing systems found in nature. [ 1 ] It is a branch of science that encompasses a broad range of methodologies ...
Central pattern generators (CPGs) are self-organizing biological neural circuits [ 1 ][ 2 ] that produce rhythmic outputs in the absence of rhythmic input. [ 3 ][ 4 ][ 5 ] They are the source of the tightly-coupled patterns of neural activity that drive rhythmic and stereotyped motor behaviors like walking, swimming, breathing, or chewing.
Biological computers use biologically derived molecules — such as DNA and/or proteins — to perform digital or real computations. The development of biocomputers has been made possible by the expanding new science of nanobiotechnology. The term nanobiotechnology can be defined in multiple ways; in a more general sense, nanobiotechnology can ...
Computational phylogenetics. Computational phylogenetics, phylogeny inference, or phylogenetic inference focuses on computational and optimization algorithms, heuristics, and approaches involved in phylogenetic analyses. The goal is to find a phylogenetic tree representing optimal evolutionary ancestry between a set of genes, species, or taxa.