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In biochemistry, a Ramachandran plot (also known as a Rama plot, a Ramachandran diagram or a [φ,ψ] plot), originally developed in 1963 by G. N. Ramachandran, C. Ramakrishnan, and V. Sasisekharan, [1] is a way to visualize energetically allowed regions for backbone dihedral angles ( also called as torsional angles , phi and psi angles ) ψ ...
When the body temperature is too high or too low, the blood vessels will change size accordingly to bring the body’s temperature back to normal. In this diagram, the tube-shaped objects represent blood vessels and the red and blue objects represent thermometers. The middle blood vessel is sized for a blood vessel at normal body temperature.
Symmetry breaking in pitchfork bifurcation as the parameter ε is varied. ε = 0 is the case of symmetric pitchfork bifurcation.. In a dynamical system such as ¨ + (;) + =, which is structurally stable when , if a bifurcation diagram is plotted, treating as the bifurcation parameter, but for different values of , the case = is the symmetric pitchfork bifurcation.
In the less extensive technique of equilibrium unfolding, the fractions of folded and unfolded molecules (denoted as and , respectively) are measured as the solution conditions are gradually changed from those favoring the native state to those favoring the unfolded state, e.g., by adding a denaturant such as guanidinium hydrochloride or urea.
Pourbaix diagram of iron. [1] The Y axis corresponds to voltage potential. In electrochemistry, and more generally in solution chemistry, a Pourbaix diagram, also known as a potential/pH diagram, E H –pH diagram or a pE/pH diagram, is a plot of possible thermodynamically stable phases (i.e., at chemical equilibrium) of an aqueous electrochemical system.
A favorable reaction is one in which the change in free energy ∆G° is negative or in other words, the free energy of product, G° product, is less than the free energy of the starting materials, G° reactant. ∆G°> 0 corresponds to an unfavorable reaction.
Recall that the relationship represented in a Davenport diagram is a relationship between three variables: P CO 2, bicarbonate concentration and pH.Thus, Fig. 7 can be thought of as a topographical map—that is, a two-dimensional representation of a three-dimensional surface—where each isopleth indicates a different partial pressure or “altitude.”
The majority of β-strands are arranged adjacent to other strands and form an extensive hydrogen bond network with their neighbors in which the N−H groups in the backbone of one strand establish hydrogen bonds with the C=O groups in the backbone of the adjacent strands. In the fully extended β-strand, successive side chains point straight up ...