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  2. Open reading frame - Wikipedia

    en.wikipedia.org/wiki/Open_reading_frame

    The ORF Finder (Open Reading Frame Finder) [16] is a graphical analysis tool which finds all open reading frames of a selectable minimum size in a user's sequence or in a sequence already in the database. This tool identifies all open reading frames using the standard or alternative genetic codes. The deduced amino acid sequence can be saved in ...

  3. Intergenic region - Wikipedia

    en.wikipedia.org/wiki/Intergenic_region

    In humans, intergenic regions comprise about 50% of the genome, whereas this number is much less in bacteria (15%) and yeast (30%). [4]As with most other non-coding DNA, the GC-content of intergenic regions vary considerably among species.

  4. Bacterial genome - Wikipedia

    en.wikipedia.org/wiki/Bacterial_genome

    A study that included, but was not limited to, 478 bacterial genomes, concluded that as genome size increases, the number of genes increases at a disproportionately slower rate in eukaryotes than in non-eukaryotes. Thus, the proportion of non-coding DNA goes up with genome size more quickly in non-bacteria than in bacteria.

  5. Genome size - Wikipedia

    en.wikipedia.org/wiki/Genome_size

    Genome size ranges (in base pairs) of various life forms. Genome size is the total amount of DNA contained within one copy of a single complete genome.It is typically measured in terms of mass in picograms (trillionths or 10 −12 of a gram, abbreviated pg) or less frequently in daltons, or as the total number of nucleotide base pairs, usually in megabases (millions of base pairs, abbreviated ...

  6. Gene density - Wikipedia

    en.wikipedia.org/wiki/Gene_density

    In genetics, the gene density of an organism's genome is the ratio of the number of genes per number of base pairs, usually written in terms of a million base pairs, or megabase (Mb). The human genome has a gene density of 11-15 genes/Mb, while the genome of the C. elegans roundworm is estimated to have 200.

  7. Ka/Ks ratio - Wikipedia

    en.wikipedia.org/wiki/Ka/Ks_ratio

    Although the K a /K s ratio is a good indicator of selective pressure at the sequence level, evolutionary change can often take place in the regulatory region of a gene which affects the level, timing or location of gene expression. K a /K s analysis will not detect such change. It will only calculate selective pressure within protein coding ...

  8. Genomic library - Wikipedia

    en.wikipedia.org/wiki/Genomic_library

    Bacterial artificial chromosomes (BACs) are circular DNA molecules, usually about 7kb in length, that are capable of holding inserts up to 300kb in size. BAC vectors contain a replicon derived from E. coli F factor , which ensures they are maintained at one copy per cell. [ 4 ]

  9. Saccharomyces Genome Database - Wikipedia

    en.wikipedia.org/wiki/Saccharomyces_Genome_Database

    The SGD provides internet access to the complete Saccharomyces cerevisiae genomic DNA sequence, its genes and their products, the phenotypes of its mutants, and the literature supporting these data. In the peer-reviewed literature report, experimental results on function and interaction of yeast genes are extracted by high-quality manual ...