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Maximum subarray problems arise in many fields, such as genomic sequence analysis and computer vision.. Genomic sequence analysis employs maximum subarray algorithms to identify important biological segments of protein sequences that have unusual properties, by assigning scores to points within the sequence that are positive when a motif to be recognized is present, and negative when it is not ...
Nicosia, Pacifici and Pferschy study the price of fairness, that is, the ratio between the maximum sum of utilities, and the maximum sum of utilities in a fair solution: For shared items: the price-of-fairness of max-min fairness is unbounded. For example, suppose there are four items with values 1, e, e, e, for some small e>0. The maximum sum ...
SSP can also be regarded as an optimization problem: find a subset whose sum is at most T, and subject to that, as close as possible to T. It is NP-hard, but there are several algorithms that can solve it reasonably quickly in practice. SSP is a special case of the knapsack problem and of the multiple subset sum problem.
A longest common subsequence (LCS) is the longest subsequence common to all sequences in a set of sequences (often just two sequences). It differs from the longest common substring : unlike substrings, subsequences are not required to occupy consecutive positions within the original sequences.
One can find the lengths and starting positions of the longest common substrings of and in (+) time with the help of a generalized suffix tree.A faster algorithm can be achieved in the word RAM model of computation if the size of the input alphabet is in ( (+)).
A generalization of the Viterbi algorithm, termed the max-sum algorithm (or max-product algorithm) can be used to find the most likely assignment of all or some subset of latent variables in a large number of graphical models, e.g. Bayesian networks, Markov random fields and conditional random fields.
The longest increasing subsequence problem is closely related to the longest common subsequence problem, which has a quadratic time dynamic programming solution: the longest increasing subsequence of a sequence is the longest common subsequence of and , where is the result of sorting.
The longest alternating subsequence problem has also been studied in the setting of online algorithms, in which the elements of are presented in an online fashion, and a decision maker needs to decide whether to include or exclude each element at the time it is first presented, without any knowledge of the elements that will be presented in the future, and without the possibility of recalling ...