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  2. Root mean square deviation of atomic positions - Wikipedia

    en.wikipedia.org/wiki/Root_mean_square_deviation...

    RMSD—another tutorial on how to calculate RMSD with example code; Secondary Structure Matching (SSM) — a tool for protein structure comparison. Uses RMSD. GDT, LCS and LGA — different structure comparison measures. Description and services. SuperPose — a protein superposition server. Uses RMSD. superpose — structural alignment based ...

  3. Root mean square deviation - Wikipedia

    en.wikipedia.org/wiki/Root_mean_square_deviation

    In experimental psychology, the RMSD is used to assess how well mathematical or computational models of behavior explain the empirically observed behavior. In GIS, the RMSD is one measure used to assess the accuracy of spatial analysis and remote sensing. In hydrogeology, RMSD and NRMSD are used to evaluate the calibration of a groundwater ...

  4. Kabsch algorithm - Wikipedia

    en.wikipedia.org/wiki/Kabsch_algorithm

    Let P and Q be two sets, each containing N points in .We want to find the transformation from Q to P.For simplicity, we will consider the three-dimensional case (=).The sets P and Q can each be represented by N × 3 matrices with the first row containing the coordinates of the first point, the second row containing the coordinates of the second point, and so on, as shown in this matrix:

  5. Mean squared error - Wikipedia

    en.wikipedia.org/wiki/Mean_squared_error

    The MSE either assesses the quality of a predictor (i.e., a function mapping arbitrary inputs to a sample of values of some random variable), or of an estimator (i.e., a mathematical function mapping a sample of data to an estimate of a parameter of the population from which the data is sampled).

  6. Coefficient of variation - Wikipedia

    en.wikipedia.org/wiki/Coefficient_of_variation

    In these examples, we will take the values given as the entire population of values. The data set [100, 100, 100] has a population standard deviation of 0 and a coefficient of variation of 0 / 100 = 0; The data set [90, 100, 110] has a population standard deviation of 8.16 and a coefficient of variation of 8.16 / 100 = 0.0816

  7. Peak signal-to-noise ratio - Wikipedia

    en.wikipedia.org/wiki/Peak_signal-to-noise_ratio

    Typical values for the PSNR in lossy image and video compression are between 30 and 50 dB, provided the bit depth is 8 bits, where higher is better. The processing quality of 12-bit images is considered high when the PSNR value is 60 dB or higher. [3] [4] For 16-bit data typical values for the PSNR are between 60 and 80 dB.

  8. Category:Articles with example Java code - Wikipedia

    en.wikipedia.org/wiki/Category:Articles_with...

    Persist (Java tool) Pointer (computer programming) Polymorphism (computer science) Population-based incremental learning; Prepared statement; Producer–consumer problem; Project Valhalla (Java language) Prototype pattern; Proxy pattern

  9. Root mean square - Wikipedia

    en.wikipedia.org/wiki/Root_mean_square

    In mathematics, the root mean square (abbrev. RMS, RMS or rms) of a set of numbers is the square root of the set's mean square. [1] Given a set , its RMS is denoted as either or .