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A high-performance computing program for selecting the model of protein evolution that best fits a given set of aligned sequences: Maximum likelihood, AIC, BIC, DT: D. Darriba, GL. Taboada, R. Doallo, D. Posada PyCogent Software library for genomic biology
Name Description OS 1 Citation ARB An integrated software environment for tree visualisation and annotation: LM [19] Archaeopteryx: Java tree viewer and editor (used to be ATV) [20] BioNumerics: Universal platform for the management, storage and analysis of all types of biological data, including tree and network inference of sequence data: W ...
The site is a resource for identifying taxonomic information (scientific names) as well as common names [3] on more than 500,000 accessions (distinct varieties, cultivars etc.) of plants covering 10,000 species; [4] [5] both economically important ones [3] and wild species.
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Plants of the World: An Illustrated Encyclopedia of Vascular Plants. Chicago, Illinois: Kew Publishing and The University of Chicago Press. ISBN 978-0-226-52292-0. Coombes, Allen (2012). The A to Z of Plant Names: A Quick Reference Guide to 4000 Garden Plants. Portland, Oregon: Timber Press. ISBN 978-1-60469-196-2. Cullen, Katherine E. (2006).
The system provides clear definitions and codes for recording plant distributions at four scales or levels, from "botanical continents" down to parts of large countries. Current users of the system include the International Union for Conservation of Nature (IUCN), and the Germplasm Resources Information Network (GRIN). [ 1 ]
Name Description OS License Site BioTapestry: interactive tool for building, visualizing, and simulating genetic regulatory networks multiplatform (Java-based) LGPL: Cytoscape: data integration, network visualization, and analysis multiplatform (Java-based) LGPL: GenMAPP: visualize and analyze genomic data in the context of pathways Windows ...
Botanical nomenclature is closely linked to plant taxonomy, and botanical nomenclature serves plant taxonomy, but nevertheless botanical nomenclature is separate from plant taxonomy. Botanical nomenclature is merely the body of rules prescribing which name applies to that taxon (see correct name ) and if a new name may (or must) be coined.