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Edit distance matrix for two words using cost of substitution as 1 and cost of deletion or insertion as 0.5. For example, the Levenshtein distance between "kitten" and "sitting" is 3, since the following 3 edits change one into the other, and there is no way to do it with fewer than 3 edits: kitten → sitten (substitution of "s" for "k"),
The geometric-distance matrix is a different type of distance matrix that is based on the graph-theoretical distance matrix of a molecule to represent and graph the 3-D molecule structure. [8] The geometric-distance matrix of a molecular structure G is a real symmetric n x n matrix defined in the same way as a 2-D matrix.
For a fixed length n, the Hamming distance is a metric on the set of the words of length n (also known as a Hamming space), as it fulfills the conditions of non-negativity, symmetry, the Hamming distance of two words is 0 if and only if the two words are identical, and it satisfies the triangle inequality as well: [2] Indeed, if we fix three words a, b and c, then whenever there is a ...
A metric space defined over a set of points in terms of distances in a graph defined over the set is called a graph metric. The vertex set (of an undirected graph) and the distance function form a metric space, if and only if the graph is connected. The eccentricity ϵ(v) of a vertex v is the greatest distance between v and any other vertex; in ...
In group theory, a word metric on a discrete group is a way to measure distance between any two elements of .As the name suggests, the word metric is a metric on , assigning to any two elements , of a distance (,) that measures how efficiently their difference can be expressed as a word whose letters come from a generating set for the group.
The graph edit distance between two graphs is related to the string edit distance between strings. With the interpretation of strings as connected , directed acyclic graphs of maximum degree one, classical definitions of edit distance such as Levenshtein distance , [ 3 ] [ 4 ] Hamming distance [ 5 ] and Jaro–Winkler distance may be ...
The higher the Jaro–Winkler distance for two strings is, the less similar the strings are. The score is normalized such that 0 means an exact match and 1 means there is no similarity. The original paper actually defined the metric in terms of similarity, so the distance is defined as the inversion of that value (distance = 1 − similarity).
Martin Tompa [40] proposed a directed graph version of the Erdős number problem, by orienting edges of the collaboration graph from the alphabetically earlier author to the alphabetically later author and defining the monotone Erdős number of an author to be the length of a longest path from Erdős to the author in this directed graph. He ...