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  2. CRISPR - Wikipedia

    en.wikipedia.org/wiki/CRISPR

    New spacers are added to a CRISPR array in a directional manner, [32] occurring preferentially, [81] [124] [125] [132] [133] but not exclusively, adjacent [127] [130] to the leader sequence. Analysis of the type I-E system from E. coli demonstrated that the first direct repeat adjacent to the leader sequence is copied, with the newly acquired ...

  3. CRISPR RNA - Wikipedia

    en.wikipedia.org/wiki/CRISPR_RNA

    CRISPR RNA or crRNA is a RNA transcript from the CRISPR locus. [1] CRISPR-Cas (clustered, regularly interspaced short palindromic repeats - CRISPR associated systems) is an adaptive immune system found in bacteria and archaea to protect against mobile genetic elements, like viruses, plasmids, and transposons. [2] The CRISPR locus contains a ...

  4. Cre-Lox recombination - Wikipedia

    en.wikipedia.org/wiki/Cre-Lox_recombination

    Cre-Lox recombination involves the targeting of a specific sequence of DNA and splicing it with the help of an enzyme called Cre recombinase.Cre-Lox recombination is commonly used to circumvent embryonic lethality caused by systemic inactivation of many genes.

  5. Cas12a - Wikipedia

    en.wikipedia.org/wiki/Cas12a

    The CRISPR-Cas12a system consist of a Cas12a enzyme and a guide RNA that finds and positions the complex at the correct spot on the double helix to cleave target DNA. CRISPR-Cas12a systems activity has three stages: [3] Adaptation: Cas1 and Cas2 proteins facilitate the adaptation of small fragments of DNA into the CRISPR array.

  6. Gene targeting - Wikipedia

    en.wikipedia.org/wiki/Gene_targeting

    The user (usually a scientist) will design the repair template to contain the desired edit, flanked by DNA sequence corresponding (homologous) to the region of DNA that the user wants to edit; hence the edit is targeted to a particular genomic region. In this way Gene Targeting is distinct from natural homology-directed repair, during which the ...

  7. Guide RNA - Wikipedia

    en.wikipedia.org/wiki/Guide_RNA

    The first stage involves the extension of bases in the CRISPR locus region by addition of foreign DNA spacers in the genome sequence. Proteins like cas1 and cas2, assist in finding new spacers. The next stage involves transcription of CRISPR: pre-crRNA (precursor CRISPR RNA) are expressed by the transcription of CRISPR repeat-spacer array.

  8. CRISPR gene editing - Wikipedia

    en.wikipedia.org/wiki/CRISPR_gene_editing

    CRISPR-Cas9 genome editing techniques have many potential applications. The use of the CRISPR-Cas9-gRNA complex for genome editing [10] was the AAAS's choice for Breakthrough of the Year in 2015. [11] Many bioethical concerns have been raised about the prospect of using CRISPR for germline editing, especially in human embryos. [12]

  9. Off-target genome editing - Wikipedia

    en.wikipedia.org/wiki/Off-target_genome_editing

    The fusion of both the recognition sequence specificity CRISPR RNA (crRNA) and transactivating RNA (tracrRNA) is commonly used in experiments and called a single guide RNA (sgRNA). [25] It performs both functions: the first 20 nucleotides of the sgRNA are complementary to the DNA target sequence (cr function), while the nucleotides following ...

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