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  2. Molecular configuration - Wikipedia

    en.wikipedia.org/wiki/Molecular_configuration

    The molecular configuration of a molecule is the permanent geometry that results from the spatial arrangement of its bonds. [1] The ability of the same set of atoms to form two or more molecules with different configurations is stereoisomerism. This is distinct from constitutional isomerism which arises from atoms being connected in a different ...

  3. Rotamer - Wikipedia

    en.wikipedia.org/wiki/Rotamer

    The gauche conformation on the right is a conformer, while the eclipsed conformation on the left is a transition state between conformers. Above: Newman projection; below: depiction of spatial orientation. In chemistry, rotamers are chemical species that differ from one another primarily due to rotations about one or more single bonds.

  4. Configuration entropy - Wikipedia

    en.wikipedia.org/wiki/Configuration_entropy

    In statistical mechanics, configuration entropy is the portion of a system's entropy that is related to discrete representative positions of its constituent particles. For example, it may refer to the number of ways that atoms or molecules pack together in a mixture, alloy or glass, the number of conformations of a molecule, or the number of spin configurations in a magnet.

  5. Conformational entropy - Wikipedia

    en.wikipedia.org/wiki/Conformational_entropy

    In chemical thermodynamics, conformational entropy is the entropy associated with the number of conformations of a molecule.The concept is most commonly applied to biological macromolecules such as proteins and RNA, but also be used for polysaccharides and other molecules.

  6. Absolute configuration - Wikipedia

    en.wikipedia.org/wiki/Absolute_configuration

    In chemistry, absolute configuration refers to the spatial arrangement of atoms within a molecular entity (or group) that is chiral, and its resultant stereochemical description. [1] Absolute configuration is typically relevant in organic molecules where carbon is bonded to four different substituents .

  7. Conformational change - Wikipedia

    en.wikipedia.org/wiki/Conformational_change

    Its shape can change in response to changes in its environment or other factors; each possible shape is called a conformation, and a transition between them is called a conformational change. Factors that may induce such changes include temperature, pH , voltage , light in chromophores , concentration of ions , phosphorylation , or the binding ...

  8. Walsh diagram - Wikipedia

    en.wikipedia.org/wiki/Walsh_diagram

    Walsh Diagram of an HAH molecule. Walsh diagrams, often called angular coordinate diagrams or correlation diagrams, are representations of calculated orbital binding energies of a molecule versus a distortion coordinate (bond angles), used for making quick predictions about the geometries of small molecules.

  9. Haworth projection - Wikipedia

    en.wikipedia.org/wiki/Haworth_projection

    In chemistry, a Haworth projection is a common way of writing a structural formula to represent the cyclic structure of monosaccharides with a simple three-dimensional perspective. Haworth projection approximate the shapes of the actual molecules better for furanoses —which are in reality nearly planar—than for pyranoses that exist in ...