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The pseudoknot was first recognized in the turnip yellow mosaic virus in 1982. [2] Pseudoknots fold into knot-shaped three-dimensional conformations but are not true topological knots . These structures are categorized as cross (X) topology within the circuit topology framework, which, in contrast to knot theory, is a contact-based approach.
The pseudoknot motif occurs when a single stranded region of a hairpin loop base-pairs with an upstream or downstream sequence within the same RNA strand. The two resulting duplex regions often stack upon one another, forming a stable coaxially stacked composite helix.
Lists of shapes cover different types of geometric shape and related topics. They include mathematics topics and other lists of shapes, such as shapes used by drawing ...
Name Description Knots [Note 1]Links References trRosettaRNA: trRosettaRNA is an algorithm for automated prediction of RNA 3D structure. It builds the RNA structure by Rosetta energy minimization, with deep learning restraints from a transformer network (RNAformer). trRosettaRNA has been validated in blind tests, including CASP15 and RNA-Puzzles, which suggests that the automated predictions ...
You are free: to share – to copy, distribute and transmit the work; to remix – to adapt the work; Under the following conditions: attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made.
UCLA football coach DeShaun Foster has moved quickly to hire Tino Sunseri as its next offensive coordinator. The Bruins moved on from Eric Bieniemy last week after one season as the program’s ...
Selecting the perfect engagement ring isn't simply about the brilliance or the size of the diamond, it's also about the meaning behind the ring shape. Many shoppers wonder, "What does each diamond ...
List of mathematical constants (typically letters and compound symbols) Glossary of mathematical symbols; List of physical constants (typically letters and compound symbols) List of common physics notations (typically letters used as variable names in equations) Rod of Asclepius / Caduceus as a symbol of medicine
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