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#!/usr/bin/env python3 import numpy as np def power_iteration (A, num_iterations: int): # Ideally choose a random vector # To decrease the chance that our vector # Is orthogonal to the eigenvector b_k = np. random. rand (A. shape [1]) for _ in range (num_iterations): # calculate the matrix-by-vector product Ab b_k1 = np. dot (A, b_k) # calculate the norm b_k1_norm = np. linalg. norm (b_k1 ...
NumPy (pronounced / ˈ n ʌ m p aɪ / NUM-py) is a library for the Python programming language, adding support for large, multi-dimensional arrays and matrices, along with a large collection of high-level mathematical functions to operate on these arrays. [3]
Condition numbers can also be defined for nonlinear functions, and can be computed using calculus.The condition number varies with the point; in some cases one can use the maximum (or supremum) condition number over the domain of the function or domain of the question as an overall condition number, while in other cases the condition number at a particular point is of more interest.
The Python package NumPy provides a pseudoinverse calculation through its functions matrix.I and linalg.pinv; its pinv uses the SVD-based algorithm. SciPy adds a function scipy.linalg.pinv that uses a least-squares solver. The MASS package for R provides a calculation of the Moore–Penrose inverse through the ginv function. [24]
In Python, the function cholesky from the numpy.linalg module performs Cholesky decomposition. In Matlab, the chol function gives the Cholesky decomposition. Note that chol uses the upper triangular factor of the input matrix by default, i.e. it computes = where is upper triangular. A flag can be passed to use the lower triangular factor instead.
The Lanczos algorithm is most often brought up in the context of finding the eigenvalues and eigenvectors of a matrix, but whereas an ordinary diagonalization of a matrix would make eigenvectors and eigenvalues apparent from inspection, the same is not true for the tridiagonalization performed by the Lanczos algorithm; nontrivial additional steps are needed to compute even a single eigenvalue ...
Matrix types (special types like bidiagonal/tridiagonal are not listed): Real – general (nonsymmetric) real; Complex – general (nonsymmetric) complex; SPD – symmetric positive definite (real)
It can be thought of as the point of half of the mass of the distribution; the number of bases from all contigs longer than the N50 will be close to the number of bases from all contigs shorter than the N50. For example, consider 9 contigs with the lengths 2,3,4,5,6,7,8,9, and 10; their sum is 54, half of the sum is 27, and the size of the ...