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  2. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    FASTGenomics enables the user to upload their own data and generate customized and reproducible workflows for the exploration and analysis of gene expression data (Scholz et al. 2018). FX FX is a user-Friendly RNA-Seq gene eXpression analysis tool, empowered by the concept of cloud-computing. With FX, you can simply upload your RNA-Seq raw ...

  3. Template:Gene expression - Wikipedia

    en.wikipedia.org/wiki/Template:Gene_expression

    To change this template's initial visibility, the |state= parameter may be used: {{Gene expression | state = collapsed}} will show the template collapsed, i.e. hidden apart from its title bar. {{Gene expression | state = expanded}} will show the template expanded, i.e. fully visible.

  4. Microarray analysis techniques - Wikipedia

    en.wikipedia.org/wiki/Microarray_analysis_techniques

    Example of an approximately 40,000 probe spotted oligo microarray with enlarged inset to show detail. Microarray analysis techniques are used in interpreting the data generated from experiments on DNA (Gene chip analysis), RNA, and protein microarrays, which allow researchers to investigate the expression state of a large number of genes – in many cases, an organism's entire genome – in a ...

  5. DNA and RNA codon tables - Wikipedia

    en.wikipedia.org/wiki/DNA_and_RNA_codon_tables

    A codon table can be used to translate a genetic code into a sequence of amino acids. [1] [2] The standard genetic code is traditionally represented as an RNA codon table, because when proteins are made in a cell by ribosomes, it is messenger RNA (mRNA) that directs protein synthesis.

  6. Expression Atlas - Wikipedia

    en.wikipedia.org/wiki/Expression_Atlas

    The Expression Atlas allows searches by gene, splice variant, protein attribute, disease, treatment or organism part (cell types/tissues). Individual genes or gene sets can be searched for. All datasets in Expression Atlas have its metadata manually curated and its data analysed through standardised analysis pipelines.

  7. Genetic algorithm - Wikipedia

    en.wikipedia.org/wiki/Genetic_algorithm

    In some problems, it is hard or even impossible to define the fitness expression; in these cases, a simulation may be used to determine the fitness function value of a phenotype (e.g. computational fluid dynamics is used to determine the air resistance of a vehicle whose shape is encoded as the phenotype), or even interactive genetic algorithms ...

  8. DNA annotation - Wikipedia

    en.wikipedia.org/wiki/DNA_annotation

    Generalized flowchart of a structural genome annotation pipeline. First, the repetitive regions of an assembled genome are masked by using a repeat library. Then, optionally, the masked sequence is aligned with all the available evidence (ESTs, RNAs, and proteins) of the organism being annotated.

  9. Gene expression - Wikipedia

    en.wikipedia.org/wiki/Gene_expression

    The process of gene expression is used by all known life—eukaryotes (including multicellular organisms), prokaryotes (bacteria and archaea), and utilized by viruses—to generate the macromolecular machinery for life. In genetics, gene expression is the most fundamental level at which the genotype gives rise to the phenotype, i.e. observable ...

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