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  2. Ultraconserved element - Wikipedia

    en.wikipedia.org/wiki/Ultraconserved_element

    Similarly, the same sequences in the fugu genome have 68% identity to human UCEs, despite the human genome only reliably aligning to 1.8% of the fugu genome. [4] Despite often being noncoding DNA, [6] some ultraconserved elements have been found to be transcriptionally active, producing non-coding RNA molecules. [7]

  3. Conserved sequence - Wikipedia

    en.wikipedia.org/wiki/Conserved_sequence

    Within a sequence, amino acids that are important for folding, structural stability, or that form a binding site may be more highly conserved. [17] [18] The nucleic acid sequence of a protein coding gene may also be conserved by other selective pressures. The codon usage bias in some organisms may restrict the types of synonymous mutations in a ...

  4. Multispecies coalescent process - Wikipedia

    en.wikipedia.org/wiki/Multispecies_coalescent...

    Multispecies Coalescent Process is a stochastic process model that describes the genealogical relationships for a sample of DNA sequences taken from several species. [1] [2] It represents the application of coalescent theory to the case of multiple species.

  5. Conserved signature indels - Wikipedia

    en.wikipedia.org/wiki/Conserved_signature_indels

    Conserved signature inserts and deletions (CSIs) in protein sequences provide an important category of molecular markers for understanding phylogenetic relationships. [1] [2] CSIs, brought about by rare genetic changes, provide useful phylogenetic markers that are generally of defined size and they are flanked on both sides by conserved regions to ensure their reliability.

  6. Conserved non-coding sequence - Wikipedia

    en.wikipedia.org/wiki/Conserved_non-coding_sequence

    A conserved non-coding sequence (CNS) is a DNA sequence of noncoding DNA that is evolutionarily conserved. These sequences are of interest for their potential to regulate gene production. [1] CNSs in plants [2] and animals [1] are highly associated with transcription factor binding sites and other cis-acting regulatory elements.

  7. Horizontal gene transfer in evolution - Wikipedia

    en.wikipedia.org/wiki/Horizontal_gene_transfer...

    The uncertainty of any inferred phylogenetic tree based on a single gene can be resolved by using several common genes or even evidence from whole genomes. [12] One such approach, sometimes called 'multi-locus typing', has been used to deduce phylogenic trees for organisms that exchange genes, such as meningitis bacteria. [13]

  8. Coalescent theory - Wikipedia

    en.wikipedia.org/wiki/Coalescent_theory

    Coalescent theory is a model of how alleles sampled from a population may have originated from a common ancestor.In the simplest case, coalescent theory assumes no recombination, no natural selection, and no gene flow or population structure, meaning that each variant is equally likely to have been passed from one generation to the next.

  9. List of sequenced animal genomes - Wikipedia

    en.wikipedia.org/wiki/List_of_sequenced_animal...

    This list of sequenced animal genomes contains animal species for which complete genome sequences have been assembled, annotated and published. Substantially complete draft genomes are included, but not partial genome sequences or organelle-only sequences.