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  2. Lambda phage - Wikipedia

    en.wikipedia.org/wiki/Lambda_phage

    The DNA passes through the mannose permease complex in the inner membrane [10] [11] (encoded by the manXYZ genes) and immediately circularises using the cos sites, 12-base G-C-rich cohesive "sticky ends". The single-strand viral DNA ends are ligated by host DNA ligase. It is not generally appreciated that the 12 bp lambda cohesive ends were the ...

  3. Sticky and blunt ends - Wikipedia

    en.wikipedia.org/wiki/Sticky_and_blunt_ends

    The simplest DNA end of a double stranded molecule is called a blunt end. Blunt ends are also known as non-cohesive ends. In a blunt-ended molecule, both strands terminate in a base pair. Blunt ends are not always desired in biotechnology since when using a DNA ligase to join two molecules into one, the yield is significantly lower with blunt ...

  4. Cosmid - Wikipedia

    en.wikipedia.org/wiki/Cosmid

    Those cells which did not take up the cosmid would be unable to grow. [3] Unlike plasmids, they can also be packaged in vitro into phage capsids, a step which requires cohesive ends, also known as cos sites also used in cloning with a lambda phage as a vector, however nearly all the lambda genes have been deleted with the exception of the cos ...

  5. Cell-based models - Wikipedia

    en.wikipedia.org/wiki/Cell-based_models

    Cell-based models are mathematical models that represent biological cells as discrete entities. Within the field of computational biology they are often simply called agent-based models [1] of which they are a specific application and they are used for simulating the biomechanics of multicellular structures such as tissues. to study the influence of these behaviors on how tissues are organised ...

  6. Ligation (molecular biology) - Wikipedia

    en.wikipedia.org/wiki/Ligation_(molecular_biology)

    EcoRI for example generates an AATT end, and since A and T have lower melting temperature than C and G, its melting temperature T m is low at around 6 ° C. [21] For most restriction enzymes, the overhangs generated have a T m that is around 15 ° C. [20] For practical purposes, sticky end ligations are performed at 12-16 ° C, or at room ...

  7. Gell-Mann matrices - Wikipedia

    en.wikipedia.org/wiki/Gell-Mann_matrices

    These properties were chosen by Gell-Mann because they then naturally generalize the Pauli matrices for SU(2) to SU(3), which formed the basis for Gell-Mann's quark model. [2] Gell-Mann's generalization further extends to general SU. For their connection to the standard basis of Lie algebras, see the Weyl–Cartan basis.

  8. Cohesin - Wikipedia

    en.wikipedia.org/wiki/Cohesin

    Changing the transcription pattern of genes changes the location of cohesin indicating that localization of cohesin may depend on transcription. [36] In another model, chromatin loop extrusion is pushed by transcription generated supercoiling ensuring also that cohesin relocalizes quickly and loops grow with reasonable speed and in a good ...

  9. 65 nm process - Wikipedia

    en.wikipedia.org/wiki/65_nm_process

    For comparison, cellular ribosomes are about 20 nm end-to-end. A crystal of bulk silicon has a lattice constant of 0.543 nm, so such transistors are on the order of 100 atoms across. By September 2007, Intel , AMD , IBM , UMC and Chartered were also producing 65 nm chips.

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