enow.com Web Search

  1. Ad

    related to: bioinformatics with python cookbook

Search results

  1. Results from the WOW.Com Content Network
  2. Biopython - Wikipedia

    en.wikipedia.org/wiki/Biopython

    The Biopython project is an open-source collection of non-commercial Python tools for computational biology and bioinformatics, created by an international association of developers. [1] [4] [5] It contains classes to represent biological sequences and sequence annotations, and it is able to read and write to a variety of file formats.

  3. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Open Bioinformatics Foundation: BioPerl: Perl language toolkit Cross-platform: Artistic, GPL: Open Bioinformatics Foundation: BioPHP: PHP language toolkit with classes for DNA and protein sequence analysis, alignment, database parsing, and other bioinformatics tools Cross-platform: GPL v2 Open Bioinformatics Foundation: Biopython: Python ...

  4. Galaxy (computational biology) - Wikipedia

    en.wikipedia.org/wiki/Galaxy_(computational_biology)

    Galaxy is open-source software implemented using the Python programming language. It is developed by the Galaxy team [23] at Penn State, Johns Hopkins University, Oregon Health & Science University, and the Galaxy Community. [24] Galaxy is extensible, as new command line tools can be integrated and shared within the Galaxy ToolShed. [25]

  5. Rosalind (education platform) - Wikipedia

    en.wikipedia.org/wiki/Rosalind_(education_platform)

    Rosalind is an educational resource and web project for learning bioinformatics through problem solving and computer programming. [1] [2] [3] Rosalind users learn bioinformatics concepts through a problem tree that builds up biological, algorithmic, and programming knowledge concurrently or learn by topics, with the topic of Alignment, Combinatorics, Computational Mass Spectrometry, Heredity ...

  6. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.

  7. List of bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_bioinformatics...

    The list of bioinformatics software tools can be split up according to the license used: List of proprietary bioinformatics software; List of open-source bioinformatics software; Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on: Sequence analysis software. List of sequence alignment software

  8. Phyre - Wikipedia

    en.wikipedia.org/wiki/Phyre

    The Phyre and Phyre2 servers predict the three-dimensional structure of a protein sequence using the principles and techniques of homology modeling.Because the structure of a protein is more conserved in evolution than its amino acid sequence, a protein sequence of interest (the target) can be modeled with reasonable accuracy on a very distantly related sequence of known structure (the ...

  9. Computational biology - Wikipedia

    en.wikipedia.org/wiki/Computational_biology

    Sequence alignment is useful in a number of bioinformatics applications, such as computing the longest common subsequence of two genes or comparing variants of certain diseases. [ citation needed ] An untouched project in computational genomics is the analysis of intergenic regions, which comprise roughly 97% of the human genome. [ 19 ]

  1. Ad

    related to: bioinformatics with python cookbook